Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC16.85■□□□□ 0.29
FOXN3O00409 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
FOXN3O00409 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
FOXN3O00409 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
FOXN3O00409 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
FOXN3O00409 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC16.85■□□□□ 0.29
FOXN3O00409 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
FOXN3O00409 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC16.85■□□□□ 0.29
FOXN3O00409 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC16.85■□□□□ 0.29
FOXN3O00409 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC16.84■□□□□ 0.29
FOXN3O00409 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
FOXN3O00409 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
FOXN3O00409 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
FOXN3O00409 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
FOXN3O00409 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
FOXN3O00409 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC16.84■□□□□ 0.29
FOXN3O00409 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
FOXN3O00409 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
FOXN3O00409 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
FOXN3O00409 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
FOXN3O00409 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
FOXN3O00409 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
FOXN3O00409 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
FOXN3O00409 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
FOXN3O00409 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
FOXN3O00409 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
FOXN3O00409 NME2-201ENST00000393183 568 ntTSL 2 BASIC16.84■□□□□ 0.29
FOXN3O00409 KRT18P64-201ENST00000434946 1219 ntBASIC16.84■□□□□ 0.29
FOXN3O00409 AL512361.1-201ENST00000554200 418 ntBASIC16.84■□□□□ 0.29
FOXN3O00409 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
FOXN3O00409 CMC2-214ENST00000565925 640 ntTSL 5 BASIC16.84■□□□□ 0.29
FOXN3O00409 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC16.84■□□□□ 0.29
FOXN3O00409 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC16.84■□□□□ 0.29
FOXN3O00409 AC139530.3-201ENST00000620344 690 ntBASIC16.84■□□□□ 0.29
FOXN3O00409 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
FOXN3O00409 AC093028.1-201ENST00000622998 982 ntBASIC16.84■□□□□ 0.29
FOXN3O00409 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
FOXN3O00409 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
FOXN3O00409 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
FOXN3O00409 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
FOXN3O00409 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
FOXN3O00409 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC16.84■□□□□ 0.29
FOXN3O00409 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
FOXN3O00409 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
FOXN3O00409 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC16.84■□□□□ 0.29
FOXN3O00409 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
FOXN3O00409 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
FOXN3O00409 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
FOXN3O00409 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC16.84■□□□□ 0.29
FOXN3O00409 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
FOXN3O00409 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
FOXN3O00409 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC16.84■□□□□ 0.29
FOXN3O00409 MST1L-201ENST00000442552 2185 ntBASIC16.84■□□□□ 0.29
FOXN3O00409 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC16.84■□□□□ 0.29
FOXN3O00409 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
FOXN3O00409 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
FOXN3O00409 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
FOXN3O00409 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
FOXN3O00409 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
FOXN3O00409 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
FOXN3O00409 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
FOXN3O00409 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
FOXN3O00409 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
FOXN3O00409 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
FOXN3O00409 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
FOXN3O00409 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
FOXN3O00409 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
FOXN3O00409 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
FOXN3O00409 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC16.83■□□□□ 0.28
FOXN3O00409 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
FOXN3O00409 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
FOXN3O00409 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC16.83■□□□□ 0.28
FOXN3O00409 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
FOXN3O00409 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
FOXN3O00409 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC16.83■□□□□ 0.28
FOXN3O00409 USP40-206ENST00000443711 628 ntTSL 2 BASIC16.83■□□□□ 0.28
FOXN3O00409 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC16.83■□□□□ 0.28
FOXN3O00409 KLF2P3-201ENST00000451977 1087 ntBASIC16.83■□□□□ 0.28
FOXN3O00409 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC16.83■□□□□ 0.28
FOXN3O00409 SERBP1P3-201ENST00000459980 809 ntBASIC16.83■□□□□ 0.28
FOXN3O00409 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
FOXN3O00409 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC16.83■□□□□ 0.28
FOXN3O00409 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC16.83■□□□□ 0.28
FOXN3O00409 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
FOXN3O00409 AC126365.1-201ENST00000578585 1514 ntBASIC16.83■□□□□ 0.28
FOXN3O00409 AC015911.4-201ENST00000588022 1070 ntBASIC16.83■□□□□ 0.28
FOXN3O00409 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
FOXN3O00409 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
FOXN3O00409 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
FOXN3O00409 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC16.83■□□□□ 0.28
FOXN3O00409 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC16.83■□□□□ 0.28
FOXN3O00409 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
FOXN3O00409 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC16.83■□□□□ 0.28
FOXN3O00409 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
FOXN3O00409 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC16.83■□□□□ 0.28
FOXN3O00409 AF228730.6-201ENST00000641497 218 ntBASIC16.83■□□□□ 0.28
FOXN3O00409 AC084121.3-201ENST00000641716 218 ntBASIC16.83■□□□□ 0.28
FOXN3O00409 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
FOXN3O00409 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.83■□□□□ 0.28
FOXN3O00409 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms