Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
UPK1AO00322 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14.96□□□□□ -0.02
UPK1AO00322 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC14.96□□□□□ -0.02
UPK1AO00322 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC14.96□□□□□ -0.02
UPK1AO00322 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
UPK1AO00322 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
UPK1AO00322 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
UPK1AO00322 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
UPK1AO00322 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC14.95□□□□□ -0.02
UPK1AO00322 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC14.95□□□□□ -0.02
UPK1AO00322 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
UPK1AO00322 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC14.95□□□□□ -0.02
UPK1AO00322 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
UPK1AO00322 ZEB1-AS1-208ENST00000607166 2503 ntBASIC14.95□□□□□ -0.02
UPK1AO00322 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
UPK1AO00322 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
UPK1AO00322 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
UPK1AO00322 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
UPK1AO00322 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
UPK1AO00322 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
UPK1AO00322 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC14.95□□□□□ -0.02
UPK1AO00322 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
UPK1AO00322 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC14.95□□□□□ -0.02
UPK1AO00322 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC14.95□□□□□ -0.02
UPK1AO00322 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
UPK1AO00322 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC14.95□□□□□ -0.02
UPK1AO00322 AC105021.1-202ENST00000570572 669 ntBASIC14.95□□□□□ -0.02
UPK1AO00322 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC14.95□□□□□ -0.02
UPK1AO00322 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC14.95□□□□□ -0.02
UPK1AO00322 AC027612.4-201ENST00000605371 583 ntBASIC14.95□□□□□ -0.02
UPK1AO00322 AC003101.2-201ENST00000612557 442 ntBASIC14.95□□□□□ -0.02
UPK1AO00322 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
UPK1AO00322 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
UPK1AO00322 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
UPK1AO00322 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
UPK1AO00322 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
UPK1AO00322 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
UPK1AO00322 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
UPK1AO00322 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
UPK1AO00322 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
UPK1AO00322 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
UPK1AO00322 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
UPK1AO00322 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
UPK1AO00322 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
UPK1AO00322 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
UPK1AO00322 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
UPK1AO00322 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
UPK1AO00322 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
UPK1AO00322 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
UPK1AO00322 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC14.94□□□□□ -0.02
UPK1AO00322 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
UPK1AO00322 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
UPK1AO00322 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
UPK1AO00322 KRT8P37-201ENST00000451609 1420 ntBASIC14.94□□□□□ -0.02
UPK1AO00322 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
UPK1AO00322 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
UPK1AO00322 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
UPK1AO00322 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
UPK1AO00322 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
UPK1AO00322 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
UPK1AO00322 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
UPK1AO00322 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC14.94□□□□□ -0.02
UPK1AO00322 MIR1233-2-201ENST00000408138 82 ntBASIC14.94□□□□□ -0.02
UPK1AO00322 MIR1233-1-201ENST00000408722 82 ntBASIC14.94□□□□□ -0.02
UPK1AO00322 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
UPK1AO00322 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC14.94□□□□□ -0.02
UPK1AO00322 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC14.94□□□□□ -0.02
UPK1AO00322 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
UPK1AO00322 DNAJB3-202ENST00000449667 1266 ntBASIC14.94□□□□□ -0.02
UPK1AO00322 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC14.94□□□□□ -0.02
UPK1AO00322 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC14.94□□□□□ -0.02
UPK1AO00322 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
UPK1AO00322 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC14.94□□□□□ -0.02
UPK1AO00322 AC023511.2-201ENST00000618803 211 ntBASIC14.94□□□□□ -0.02
UPK1AO00322 AP001059.3-201ENST00000619053 235 ntBASIC14.94□□□□□ -0.02
UPK1AO00322 HADH-212ENST00000638621 741 ntTSL 5 BASIC14.94□□□□□ -0.02
UPK1AO00322 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
UPK1AO00322 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
UPK1AO00322 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
UPK1AO00322 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
UPK1AO00322 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
UPK1AO00322 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
UPK1AO00322 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
UPK1AO00322 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
UPK1AO00322 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
UPK1AO00322 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
UPK1AO00322 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
UPK1AO00322 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
UPK1AO00322 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC14.94□□□□□ -0.02
UPK1AO00322 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.94□□□□□ -0.02
UPK1AO00322 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
UPK1AO00322 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
UPK1AO00322 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
UPK1AO00322 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
UPK1AO00322 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
UPK1AO00322 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC14.93□□□□□ -0.02
UPK1AO00322 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
UPK1AO00322 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
UPK1AO00322 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
UPK1AO00322 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms