Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 TBC1D3P2-203ENST00000581291 2088 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
CHKB-CPT1BH3BT56 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC8.71□□□□□ -1.01
CHKB-CPT1BH3BT56 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
CHKB-CPT1BH3BT56 DENND3-221ENST00000523308 2959 ntTSL 2 BASIC8.71□□□□□ -1.01
CHKB-CPT1BH3BT56 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC8.71□□□□□ -1.01
CHKB-CPT1BH3BT56 PIWIL1-201ENST00000245255 3897 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
CHKB-CPT1BH3BT56 NIN-201ENST00000245441 10293 ntAPPRIS P5 TSL 5 BASIC8.71□□□□□ -1.01
CHKB-CPT1BH3BT56 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC8.71□□□□□ -1.01
CHKB-CPT1BH3BT56 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.01
CHKB-CPT1BH3BT56 COL5A2-203ENST00000618828 6399 ntTSL 5 BASIC8.71□□□□□ -1.01
CHKB-CPT1BH3BT56 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
CHKB-CPT1BH3BT56 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC8.71□□□□□ -1.01
CHKB-CPT1BH3BT56 BAZ2A-201ENST00000379441 8831 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.01
CHKB-CPT1BH3BT56 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
CHKB-CPT1BH3BT56 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC8.71□□□□□ -1.01
CHKB-CPT1BH3BT56 ZNF419-202ENST00000347466 3654 ntAPPRIS P3 TSL 2 BASIC8.71□□□□□ -1.01
CHKB-CPT1BH3BT56 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
CHKB-CPT1BH3BT56 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
CHKB-CPT1BH3BT56 AC092368.3-202ENST00000574180 1591 ntBASIC8.71□□□□□ -1.02
CHKB-CPT1BH3BT56 LLGL1-203ENST00000621229 3187 ntTSL 5 BASIC8.71□□□□□ -1.02
CHKB-CPT1BH3BT56 COL9A1-202ENST00000357250 4761 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
CHKB-CPT1BH3BT56 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
CHKB-CPT1BH3BT56 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
CHKB-CPT1BH3BT56 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
CHKB-CPT1BH3BT56 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
CHKB-CPT1BH3BT56 BUB3-202ENST00000368859 667 ntTSL 3 BASIC8.71□□□□□ -1.02
CHKB-CPT1BH3BT56 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC8.71□□□□□ -1.02
CHKB-CPT1BH3BT56 CNN2P6-201ENST00000439038 900 ntBASIC8.71□□□□□ -1.02
CHKB-CPT1BH3BT56 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC8.71□□□□□ -1.02
CHKB-CPT1BH3BT56 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC8.71□□□□□ -1.02
CHKB-CPT1BH3BT56 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
CHKB-CPT1BH3BT56 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC8.71□□□□□ -1.02
CHKB-CPT1BH3BT56 CKBP1-201ENST00000565489 1086 ntBASIC8.71□□□□□ -1.02
CHKB-CPT1BH3BT56 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC8.71□□□□□ -1.02
CHKB-CPT1BH3BT56 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
CHKB-CPT1BH3BT56 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC8.71□□□□□ -1.02
CHKB-CPT1BH3BT56 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC8.71□□□□□ -1.02
CHKB-CPT1BH3BT56 PRICKLE2-204ENST00000564377 8032 ntAPPRIS P2 TSL 5 BASIC8.71□□□□□ -1.02
CHKB-CPT1BH3BT56 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
CHKB-CPT1BH3BT56 AP1G1-218ENST00000569748 4554 ntAPPRIS P3 TSL 2 BASIC8.71□□□□□ -1.02
CHKB-CPT1BH3BT56 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
CHKB-CPT1BH3BT56 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
CHKB-CPT1BH3BT56 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC8.71□□□□□ -1.02
CHKB-CPT1BH3BT56 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.02
CHKB-CPT1BH3BT56 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
CHKB-CPT1BH3BT56 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
CHKB-CPT1BH3BT56 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
CHKB-CPT1BH3BT56 GNAS-214ENST00000371100 4029 ntTSL 5 BASIC8.71□□□□□ -1.02
CHKB-CPT1BH3BT56 MYADM-201ENST00000336967 3047 ntAPPRIS P1 TSL 2 BASIC8.71□□□□□ -1.02
CHKB-CPT1BH3BT56 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC8.71□□□□□ -1.02
CHKB-CPT1BH3BT56 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC8.71□□□□□ -1.02
CHKB-CPT1BH3BT56 C1orf109-201ENST00000358011 2355 ntAPPRIS P1 TSL 2 BASIC8.71□□□□□ -1.02
CHKB-CPT1BH3BT56 SLC12A6-205ENST00000458406 4425 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
CHKB-CPT1BH3BT56 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
CHKB-CPT1BH3BT56 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC8.71□□□□□ -1.02
CHKB-CPT1BH3BT56 TXNL1-201ENST00000217515 6894 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
CHKB-CPT1BH3BT56 PLEKHG4-204ENST00000427155 4455 ntAPPRIS P3 TSL 5 BASIC8.71□□□□□ -1.02
CHKB-CPT1BH3BT56 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC8.71□□□□□ -1.02
CHKB-CPT1BH3BT56 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
CHKB-CPT1BH3BT56 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
CHKB-CPT1BH3BT56 FAM237B-201ENST00000637645 3877 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.02
CHKB-CPT1BH3BT56 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
CHKB-CPT1BH3BT56 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC8.71□□□□□ -1.02
CHKB-CPT1BH3BT56 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC8.71□□□□□ -1.02
CHKB-CPT1BH3BT56 AC148477.4-201ENST00000613430 1793 ntBASIC8.71□□□□□ -1.02
CHKB-CPT1BH3BT56 HOXB1-202ENST00000577092 1414 ntBASIC8.71□□□□□ -1.02
CHKB-CPT1BH3BT56 SREK1-202ENST00000334121 6781 ntAPPRIS P1 TSL 2 BASIC8.71□□□□□ -1.02
CHKB-CPT1BH3BT56 KNDC1-202ENST00000368571 3925 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
CHKB-CPT1BH3BT56 PTPRN2-202ENST00000389416 4692 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.02
CHKB-CPT1BH3BT56 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC8.71□□□□□ -1.02
CHKB-CPT1BH3BT56 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC8.71□□□□□ -1.02
CHKB-CPT1BH3BT56 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
CHKB-CPT1BH3BT56 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
CHKB-CPT1BH3BT56 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
CHKB-CPT1BH3BT56 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
CHKB-CPT1BH3BT56 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC8.7□□□□□ -1.02
CHKB-CPT1BH3BT56 ADAMTS10-211ENST00000597188 3749 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
CHKB-CPT1BH3BT56 RPL13-201ENST00000311528 4498 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
CHKB-CPT1BH3BT56 SLC26A6-207ENST00000420764 2630 ntAPPRIS ALT1 TSL 1 (best) BASIC8.7□□□□□ -1.02
CHKB-CPT1BH3BT56 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
CHKB-CPT1BH3BT56 EMG1-202ENST00000599672 4898 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
CHKB-CPT1BH3BT56 AC087481.3-201ENST00000602886 1894 ntBASIC8.7□□□□□ -1.02
CHKB-CPT1BH3BT56 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC8.7□□□□□ -1.02
CHKB-CPT1BH3BT56 AL591122.2-201ENST00000624125 1853 ntBASIC8.7□□□□□ -1.02
CHKB-CPT1BH3BT56 NCSTN-202ENST00000368063 3031 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
CHKB-CPT1BH3BT56 ALDH9A1-201ENST00000354775 2696 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
CHKB-CPT1BH3BT56 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC8.7□□□□□ -1.02
CHKB-CPT1BH3BT56 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC8.7□□□□□ -1.02
CHKB-CPT1BH3BT56 BICRAL-203ENST00000614467 6510 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
CHKB-CPT1BH3BT56 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
CHKB-CPT1BH3BT56 BAIAP3-203ENST00000421665 3875 ntTSL 2 BASIC8.7□□□□□ -1.02
CHKB-CPT1BH3BT56 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
CHKB-CPT1BH3BT56 TCF3-202ENST00000344749 4289 ntTSL 5 BASIC8.7□□□□□ -1.02
CHKB-CPT1BH3BT56 YTHDF3-201ENST00000517371 3122 ntTSL 3 BASIC8.7□□□□□ -1.02
CHKB-CPT1BH3BT56 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
CHKB-CPT1BH3BT56 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
CHKB-CPT1BH3BT56 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC8.7□□□□□ -1.02
CHKB-CPT1BH3BT56 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC8.7□□□□□ -1.02
CHKB-CPT1BH3BT56 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
CHKB-CPT1BH3BT56 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC8.7□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms