Protein–RNA interactions for Protein: A6NCL1

GMNC, Geminin coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GMNCA6NCL1 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
GMNCA6NCL1 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
GMNCA6NCL1 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC15.82■□□□□ 0.12
GMNCA6NCL1 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
GMNCA6NCL1 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
GMNCA6NCL1 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC15.82■□□□□ 0.12
GMNCA6NCL1 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
GMNCA6NCL1 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
GMNCA6NCL1 AC113367.3-201ENST00000508316 1912 ntBASIC15.82■□□□□ 0.12
GMNCA6NCL1 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
GMNCA6NCL1 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
GMNCA6NCL1 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
GMNCA6NCL1 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC15.82■□□□□ 0.12
GMNCA6NCL1 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
GMNCA6NCL1 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
GMNCA6NCL1 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
GMNCA6NCL1 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
GMNCA6NCL1 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
GMNCA6NCL1 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
GMNCA6NCL1 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
GMNCA6NCL1 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
GMNCA6NCL1 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
GMNCA6NCL1 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
GMNCA6NCL1 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
GMNCA6NCL1 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
GMNCA6NCL1 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
GMNCA6NCL1 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
GMNCA6NCL1 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
GMNCA6NCL1 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC15.81■□□□□ 0.12
GMNCA6NCL1 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
GMNCA6NCL1 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
GMNCA6NCL1 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
GMNCA6NCL1 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
GMNCA6NCL1 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
GMNCA6NCL1 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
GMNCA6NCL1 NSUN5P1-202ENST00000421140 1535 ntBASIC15.81■□□□□ 0.12
GMNCA6NCL1 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC15.81■□□□□ 0.12
GMNCA6NCL1 NSUN5P2-203ENST00000457352 1529 ntBASIC15.81■□□□□ 0.12
GMNCA6NCL1 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
GMNCA6NCL1 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
GMNCA6NCL1 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
GMNCA6NCL1 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC15.81■□□□□ 0.12
GMNCA6NCL1 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
GMNCA6NCL1 Z69720.1-201ENST00000601483 472 ntBASIC15.81■□□□□ 0.12
GMNCA6NCL1 AC091076.1-201ENST00000610741 619 ntBASIC15.81■□□□□ 0.12
GMNCA6NCL1 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
GMNCA6NCL1 MTHFR-210ENST00000641407 2387 ntBASIC15.81■□□□□ 0.12
GMNCA6NCL1 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
GMNCA6NCL1 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
GMNCA6NCL1 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
GMNCA6NCL1 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
GMNCA6NCL1 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
GMNCA6NCL1 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
GMNCA6NCL1 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
GMNCA6NCL1 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
GMNCA6NCL1 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
GMNCA6NCL1 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC15.8■□□□□ 0.12
GMNCA6NCL1 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC15.8■□□□□ 0.12
GMNCA6NCL1 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC15.8■□□□□ 0.12
GMNCA6NCL1 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
GMNCA6NCL1 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
GMNCA6NCL1 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
GMNCA6NCL1 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
GMNCA6NCL1 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
GMNCA6NCL1 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
GMNCA6NCL1 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
GMNCA6NCL1 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
GMNCA6NCL1 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
GMNCA6NCL1 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
GMNCA6NCL1 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
GMNCA6NCL1 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
GMNCA6NCL1 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
GMNCA6NCL1 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
GMNCA6NCL1 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC15.8■□□□□ 0.12
GMNCA6NCL1 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC15.8■□□□□ 0.12
GMNCA6NCL1 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC15.8■□□□□ 0.12
GMNCA6NCL1 THAP5-204ENST00000438865 868 ntTSL 2 BASIC15.8■□□□□ 0.12
GMNCA6NCL1 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC15.8■□□□□ 0.12
GMNCA6NCL1 MMP17-203ENST00000535004 719 ntTSL 3 BASIC15.8■□□□□ 0.12
GMNCA6NCL1 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
GMNCA6NCL1 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC15.8■□□□□ 0.12
GMNCA6NCL1 MIR4321-201ENST00000592276 80 ntBASIC15.8■□□□□ 0.12
GMNCA6NCL1 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
GMNCA6NCL1 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
GMNCA6NCL1 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC15.8■□□□□ 0.12
GMNCA6NCL1 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
GMNCA6NCL1 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
GMNCA6NCL1 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
GMNCA6NCL1 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
GMNCA6NCL1 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
GMNCA6NCL1 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
GMNCA6NCL1 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
GMNCA6NCL1 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
GMNCA6NCL1 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
GMNCA6NCL1 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
GMNCA6NCL1 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
GMNCA6NCL1 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC15.8■□□□□ 0.12
GMNCA6NCL1 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC15.8■□□□□ 0.12
GMNCA6NCL1 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
GMNCA6NCL1 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms