Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC66A2RUB6 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC66A2RUB6 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC66A2RUB6 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
CCDC66A2RUB6 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CCDC66A2RUB6 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC17.18■□□□□ 0.34
CCDC66A2RUB6 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC17.18■□□□□ 0.34
CCDC66A2RUB6 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
CCDC66A2RUB6 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
CCDC66A2RUB6 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC17.18■□□□□ 0.34
CCDC66A2RUB6 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC66A2RUB6 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC66A2RUB6 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC66A2RUB6 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC17.18■□□□□ 0.34
CCDC66A2RUB6 AL031432.2-201ENST00000566714 459 ntBASIC17.18■□□□□ 0.34
CCDC66A2RUB6 AL928711.1-201ENST00000570165 459 ntBASIC17.18■□□□□ 0.34
CCDC66A2RUB6 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC66A2RUB6 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.18■□□□□ 0.34
CCDC66A2RUB6 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
CCDC66A2RUB6 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
CCDC66A2RUB6 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC66A2RUB6 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
CCDC66A2RUB6 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
CCDC66A2RUB6 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC66A2RUB6 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CCDC66A2RUB6 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC17.18■□□□□ 0.34
CCDC66A2RUB6 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC66A2RUB6 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
CCDC66A2RUB6 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC17.18■□□□□ 0.34
CCDC66A2RUB6 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
CCDC66A2RUB6 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC66A2RUB6 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC66A2RUB6 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC66A2RUB6 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CCDC66A2RUB6 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC66A2RUB6 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC66A2RUB6 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC66A2RUB6 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
CCDC66A2RUB6 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC66A2RUB6 C1R-201ENST00000535233 2211 ntTSL 2 BASIC17.17■□□□□ 0.34
CCDC66A2RUB6 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CCDC66A2RUB6 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC17.17■□□□□ 0.34
CCDC66A2RUB6 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC66A2RUB6 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC66A2RUB6 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
CCDC66A2RUB6 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC17.17■□□□□ 0.34
CCDC66A2RUB6 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC66A2RUB6 MED22-202ENST00000371999 987 ntTSL 3 BASIC17.17■□□□□ 0.34
CCDC66A2RUB6 SLC4A1APP2-201ENST00000424054 1259 ntBASIC17.17■□□□□ 0.34
CCDC66A2RUB6 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC66A2RUB6 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC17.17■□□□□ 0.34
CCDC66A2RUB6 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC66A2RUB6 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC17.17■□□□□ 0.34
CCDC66A2RUB6 AC117500.6-201ENST00000624871 588 ntBASIC17.17■□□□□ 0.34
CCDC66A2RUB6 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC17.17■□□□□ 0.34
CCDC66A2RUB6 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC17.17■□□□□ 0.34
CCDC66A2RUB6 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC66A2RUB6 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC17.17■□□□□ 0.34
CCDC66A2RUB6 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC17.17■□□□□ 0.34
CCDC66A2RUB6 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC66A2RUB6 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC17.17■□□□□ 0.34
CCDC66A2RUB6 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
CCDC66A2RUB6 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC66A2RUB6 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
CCDC66A2RUB6 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC66A2RUB6 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC66A2RUB6 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC17.17■□□□□ 0.34
CCDC66A2RUB6 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC66A2RUB6 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CCDC66A2RUB6 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CCDC66A2RUB6 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC66A2RUB6 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC66A2RUB6 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC66A2RUB6 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CCDC66A2RUB6 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CCDC66A2RUB6 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
CCDC66A2RUB6 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
CCDC66A2RUB6 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC66A2RUB6 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC66A2RUB6 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
CCDC66A2RUB6 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC17.16■□□□□ 0.34
CCDC66A2RUB6 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC17.16■□□□□ 0.34
CCDC66A2RUB6 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC66A2RUB6 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC66A2RUB6 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC66A2RUB6 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC17.16■□□□□ 0.34
CCDC66A2RUB6 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
CCDC66A2RUB6 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC17.16■□□□□ 0.34
CCDC66A2RUB6 AL513480.1-201ENST00000451731 511 ntBASIC17.16■□□□□ 0.34
CCDC66A2RUB6 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC17.16■□□□□ 0.34
CCDC66A2RUB6 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC17.16■□□□□ 0.34
CCDC66A2RUB6 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC17.16■□□□□ 0.34
CCDC66A2RUB6 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC17.16■□□□□ 0.34
CCDC66A2RUB6 VPS51-217ENST00000639871 243 ntTSL 5 BASIC17.16■□□□□ 0.34
CCDC66A2RUB6 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC66A2RUB6 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
CCDC66A2RUB6 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC17.16■□□□□ 0.34
CCDC66A2RUB6 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC66A2RUB6 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC66A2RUB6 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms