Protein–RNA interactions for Protein: A0A1B0GUT2

LINC00959, HCG1648656, isoform CRA_a, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959A0A1B0GUT2 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
LINC00959A0A1B0GUT2 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LINC00959A0A1B0GUT2 AC126365.1-201ENST00000578585 1514 ntBASIC10.79□□□□□ -0.68
LINC00959A0A1B0GUT2 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC10.78□□□□□ -0.68
LINC00959A0A1B0GUT2 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LINC00959A0A1B0GUT2 TPO-203ENST00000346956 2923 ntTSL 5 BASIC10.78□□□□□ -0.68
LINC00959A0A1B0GUT2 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC10.78□□□□□ -0.68
LINC00959A0A1B0GUT2 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
LINC00959A0A1B0GUT2 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
LINC00959A0A1B0GUT2 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC10.78□□□□□ -0.68
LINC00959A0A1B0GUT2 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC10.78□□□□□ -0.68
LINC00959A0A1B0GUT2 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC10.78□□□□□ -0.68
LINC00959A0A1B0GUT2 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC10.78□□□□□ -0.68
LINC00959A0A1B0GUT2 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LINC00959A0A1B0GUT2 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
LINC00959A0A1B0GUT2 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC10.78□□□□□ -0.68
LINC00959A0A1B0GUT2 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC10.78□□□□□ -0.68
LINC00959A0A1B0GUT2 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC10.78□□□□□ -0.68
LINC00959A0A1B0GUT2 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC10.78□□□□□ -0.68
LINC00959A0A1B0GUT2 KCP-203ENST00000610776 5108 ntTSL 5 BASIC10.78□□□□□ -0.68
LINC00959A0A1B0GUT2 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC10.78□□□□□ -0.68
LINC00959A0A1B0GUT2 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC10.78□□□□□ -0.68
LINC00959A0A1B0GUT2 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC10.78□□□□□ -0.68
LINC00959A0A1B0GUT2 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC10.78□□□□□ -0.68
LINC00959A0A1B0GUT2 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC10.78□□□□□ -0.68
LINC00959A0A1B0GUT2 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LINC00959A0A1B0GUT2 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
LINC00959A0A1B0GUT2 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LINC00959A0A1B0GUT2 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LINC00959A0A1B0GUT2 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LINC00959A0A1B0GUT2 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
LINC00959A0A1B0GUT2 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
LINC00959A0A1B0GUT2 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LINC00959A0A1B0GUT2 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC10.78□□□□□ -0.68
LINC00959A0A1B0GUT2 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC10.78□□□□□ -0.68
LINC00959A0A1B0GUT2 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LINC00959A0A1B0GUT2 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
LINC00959A0A1B0GUT2 HLA-H-201ENST00000383620 1096 ntBASIC10.78□□□□□ -0.68
LINC00959A0A1B0GUT2 AL590627.1-203ENST00000421194 1026 ntBASIC10.78□□□□□ -0.68
LINC00959A0A1B0GUT2 MED15P5-201ENST00000423150 992 ntBASIC10.78□□□□□ -0.68
LINC00959A0A1B0GUT2 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC10.78□□□□□ -0.68
LINC00959A0A1B0GUT2 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC10.78□□□□□ -0.68
LINC00959A0A1B0GUT2 KRT18P3-201ENST00000451602 1288 ntBASIC10.78□□□□□ -0.68
LINC00959A0A1B0GUT2 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC10.78□□□□□ -0.68
LINC00959A0A1B0GUT2 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC10.78□□□□□ -0.68
LINC00959A0A1B0GUT2 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC10.78□□□□□ -0.68
LINC00959A0A1B0GUT2 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC10.78□□□□□ -0.68
LINC00959A0A1B0GUT2 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
LINC00959A0A1B0GUT2 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC10.78□□□□□ -0.68
LINC00959A0A1B0GUT2 IGHV3OR16-6-201ENST00000568775 360 ntBASIC10.78□□□□□ -0.68
LINC00959A0A1B0GUT2 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC10.78□□□□□ -0.68
LINC00959A0A1B0GUT2 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
LINC00959A0A1B0GUT2 AC027601.4-201ENST00000611259 610 ntBASIC10.78□□□□□ -0.68
LINC00959A0A1B0GUT2 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC10.78□□□□□ -0.68
LINC00959A0A1B0GUT2 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC10.78□□□□□ -0.68
LINC00959A0A1B0GUT2 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LINC00959A0A1B0GUT2 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LINC00959A0A1B0GUT2 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC10.78□□□□□ -0.68
LINC00959A0A1B0GUT2 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LINC00959A0A1B0GUT2 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC10.78□□□□□ -0.68
LINC00959A0A1B0GUT2 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
LINC00959A0A1B0GUT2 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
LINC00959A0A1B0GUT2 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
LINC00959A0A1B0GUT2 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC10.78□□□□□ -0.68
LINC00959A0A1B0GUT2 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
LINC00959A0A1B0GUT2 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
LINC00959A0A1B0GUT2 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC10.78□□□□□ -0.68
LINC00959A0A1B0GUT2 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC10.78□□□□□ -0.68
LINC00959A0A1B0GUT2 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC10.78□□□□□ -0.68
LINC00959A0A1B0GUT2 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LINC00959A0A1B0GUT2 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
LINC00959A0A1B0GUT2 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
LINC00959A0A1B0GUT2 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LINC00959A0A1B0GUT2 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LINC00959A0A1B0GUT2 KRT8P44-201ENST00000441609 1350 ntBASIC10.77□□□□□ -0.68
LINC00959A0A1B0GUT2 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
LINC00959A0A1B0GUT2 CYP4F24P-201ENST00000586049 1580 ntBASIC10.77□□□□□ -0.68
LINC00959A0A1B0GUT2 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC10.77□□□□□ -0.68
LINC00959A0A1B0GUT2 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC10.77□□□□□ -0.68
LINC00959A0A1B0GUT2 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC10.77□□□□□ -0.68
LINC00959A0A1B0GUT2 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.68
LINC00959A0A1B0GUT2 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
LINC00959A0A1B0GUT2 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC10.77□□□□□ -0.68
LINC00959A0A1B0GUT2 CELP-203ENST00000624767 2414 ntTSL 5 BASIC10.77□□□□□ -0.68
LINC00959A0A1B0GUT2 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
LINC00959A0A1B0GUT2 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
LINC00959A0A1B0GUT2 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
LINC00959A0A1B0GUT2 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.68
LINC00959A0A1B0GUT2 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC10.77□□□□□ -0.69
LINC00959A0A1B0GUT2 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC10.77□□□□□ -0.69
LINC00959A0A1B0GUT2 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
LINC00959A0A1B0GUT2 AC091951.1-201ENST00000512854 2465 ntBASIC10.77□□□□□ -0.69
LINC00959A0A1B0GUT2 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
LINC00959A0A1B0GUT2 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
LINC00959A0A1B0GUT2 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
LINC00959A0A1B0GUT2 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC10.77□□□□□ -0.69
LINC00959A0A1B0GUT2 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
LINC00959A0A1B0GUT2 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
LINC00959A0A1B0GUT2 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
LINC00959A0A1B0GUT2 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms