Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC196A0A1B0GTZ2 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC196A0A1B0GTZ2 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC18.32■□□□□ 0.52
CCDC196A0A1B0GTZ2 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC18.32■□□□□ 0.52
CCDC196A0A1B0GTZ2 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC196A0A1B0GTZ2 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
CCDC196A0A1B0GTZ2 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC196A0A1B0GTZ2 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC18.31■□□□□ 0.52
CCDC196A0A1B0GTZ2 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC196A0A1B0GTZ2 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC196A0A1B0GTZ2 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC18.31■□□□□ 0.52
CCDC196A0A1B0GTZ2 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC18.31■□□□□ 0.52
CCDC196A0A1B0GTZ2 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC18.31■□□□□ 0.52
CCDC196A0A1B0GTZ2 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC196A0A1B0GTZ2 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC18.31■□□□□ 0.52
CCDC196A0A1B0GTZ2 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC196A0A1B0GTZ2 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC196A0A1B0GTZ2 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CCDC196A0A1B0GTZ2 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC196A0A1B0GTZ2 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC196A0A1B0GTZ2 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC196A0A1B0GTZ2 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC196A0A1B0GTZ2 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC196A0A1B0GTZ2 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC196A0A1B0GTZ2 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC18.31■□□□□ 0.52
CCDC196A0A1B0GTZ2 TOMM22P5-201ENST00000416399 439 ntBASIC18.31■□□□□ 0.52
CCDC196A0A1B0GTZ2 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC18.31■□□□□ 0.52
CCDC196A0A1B0GTZ2 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC18.31■□□□□ 0.52
CCDC196A0A1B0GTZ2 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC18.31■□□□□ 0.52
CCDC196A0A1B0GTZ2 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC18.31■□□□□ 0.52
CCDC196A0A1B0GTZ2 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC18.31■□□□□ 0.52
CCDC196A0A1B0GTZ2 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC18.31■□□□□ 0.52
CCDC196A0A1B0GTZ2 LINC01115-203ENST00000606068 577 ntBASIC18.31■□□□□ 0.52
CCDC196A0A1B0GTZ2 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC196A0A1B0GTZ2 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC18.31■□□□□ 0.52
CCDC196A0A1B0GTZ2 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC18.31■□□□□ 0.52
CCDC196A0A1B0GTZ2 SSR4P1-203ENST00000599569 2260 ntBASIC18.31■□□□□ 0.52
CCDC196A0A1B0GTZ2 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CCDC196A0A1B0GTZ2 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC18.31■□□□□ 0.52
CCDC196A0A1B0GTZ2 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC18.31■□□□□ 0.52
CCDC196A0A1B0GTZ2 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC196A0A1B0GTZ2 AC022532.1-201ENST00000624563 1728 ntBASIC18.31■□□□□ 0.52
CCDC196A0A1B0GTZ2 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC196A0A1B0GTZ2 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC196A0A1B0GTZ2 DEK-201ENST00000244776 1441 ntTSL 2 BASIC18.31■□□□□ 0.52
CCDC196A0A1B0GTZ2 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC18.31■□□□□ 0.52
CCDC196A0A1B0GTZ2 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC18.3■□□□□ 0.52
CCDC196A0A1B0GTZ2 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
CCDC196A0A1B0GTZ2 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC196A0A1B0GTZ2 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC196A0A1B0GTZ2 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC196A0A1B0GTZ2 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC18.3■□□□□ 0.52
CCDC196A0A1B0GTZ2 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC196A0A1B0GTZ2 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC18.3■□□□□ 0.52
CCDC196A0A1B0GTZ2 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CCDC196A0A1B0GTZ2 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC196A0A1B0GTZ2 NME2-201ENST00000393183 568 ntTSL 2 BASIC18.3■□□□□ 0.52
CCDC196A0A1B0GTZ2 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC196A0A1B0GTZ2 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC18.3■□□□□ 0.52
CCDC196A0A1B0GTZ2 RAB35-202ENST00000534951 939 ntTSL 2 BASIC18.3■□□□□ 0.52
CCDC196A0A1B0GTZ2 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC196A0A1B0GTZ2 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
CCDC196A0A1B0GTZ2 AC092337.1-201ENST00000568699 1129 ntBASIC18.3■□□□□ 0.52
CCDC196A0A1B0GTZ2 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC196A0A1B0GTZ2 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC196A0A1B0GTZ2 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC196A0A1B0GTZ2 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CCDC196A0A1B0GTZ2 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC196A0A1B0GTZ2 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
CCDC196A0A1B0GTZ2 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC196A0A1B0GTZ2 LINC00554-201ENST00000564841 3011 ntBASIC18.3■□□□□ 0.52
CCDC196A0A1B0GTZ2 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC18.3■□□□□ 0.52
CCDC196A0A1B0GTZ2 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC196A0A1B0GTZ2 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC196A0A1B0GTZ2 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CCDC196A0A1B0GTZ2 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC196A0A1B0GTZ2 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC196A0A1B0GTZ2 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CCDC196A0A1B0GTZ2 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC196A0A1B0GTZ2 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC196A0A1B0GTZ2 AL136379.1-201ENST00000623471 2642 ntBASIC18.29■□□□□ 0.52
CCDC196A0A1B0GTZ2 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC196A0A1B0GTZ2 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC18.29■□□□□ 0.52
CCDC196A0A1B0GTZ2 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC196A0A1B0GTZ2 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC196A0A1B0GTZ2 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC196A0A1B0GTZ2 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
CCDC196A0A1B0GTZ2 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC18.29■□□□□ 0.52
CCDC196A0A1B0GTZ2 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC18.29■□□□□ 0.52
CCDC196A0A1B0GTZ2 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CCDC196A0A1B0GTZ2 AC004461.2-201ENST00000629517 803 ntBASIC18.29■□□□□ 0.52
CCDC196A0A1B0GTZ2 AF228730.6-201ENST00000641497 218 ntBASIC18.29■□□□□ 0.52
CCDC196A0A1B0GTZ2 AC084121.3-201ENST00000641716 218 ntBASIC18.29■□□□□ 0.52
CCDC196A0A1B0GTZ2 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC196A0A1B0GTZ2 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC196A0A1B0GTZ2 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC196A0A1B0GTZ2 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC196A0A1B0GTZ2 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC196A0A1B0GTZ2 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC18.29■□□□□ 0.52
CCDC196A0A1B0GTZ2 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms