Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC35.95■■■■□ 3.35
CDC42BPBQ9Y5S2 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC35.95■■■■□ 3.35
CDC42BPBQ9Y5S2 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC35.94■■■■□ 3.34
CDC42BPBQ9Y5S2 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC35.94■■■■□ 3.34
CDC42BPBQ9Y5S2 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC35.94■■■■□ 3.34
CDC42BPBQ9Y5S2 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC35.94■■■■□ 3.34
CDC42BPBQ9Y5S2 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC35.94■■■■□ 3.34
CDC42BPBQ9Y5S2 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC35.94■■■■□ 3.34
CDC42BPBQ9Y5S2 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC35.94■■■■□ 3.34
CDC42BPBQ9Y5S2 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC35.94■■■■□ 3.34
CDC42BPBQ9Y5S2 AC024257.2-201ENST00000549699 147 ntBASIC35.94■■■■□ 3.34
CDC42BPBQ9Y5S2 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC35.93■■■■□ 3.34
CDC42BPBQ9Y5S2 AL136162.1-201ENST00000607711 1078 ntBASIC35.93■■■■□ 3.34
CDC42BPBQ9Y5S2 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC35.92■■■■□ 3.34
CDC42BPBQ9Y5S2 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC35.92■■■■□ 3.34
CDC42BPBQ9Y5S2 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC35.92■■■■□ 3.34
CDC42BPBQ9Y5S2 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC35.92■■■■□ 3.34
CDC42BPBQ9Y5S2 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC35.92■■■■□ 3.34
CDC42BPBQ9Y5S2 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC35.92■■■■□ 3.34
CDC42BPBQ9Y5S2 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC35.92■■■■□ 3.34
CDC42BPBQ9Y5S2 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC35.92■■■■□ 3.34
CDC42BPBQ9Y5S2 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC35.92■■■■□ 3.34
CDC42BPBQ9Y5S2 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC35.91■■■■□ 3.34
CDC42BPBQ9Y5S2 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC35.91■■■■□ 3.34
CDC42BPBQ9Y5S2 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC35.91■■■■□ 3.34
CDC42BPBQ9Y5S2 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC35.91■■■■□ 3.34
CDC42BPBQ9Y5S2 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC35.91■■■■□ 3.34
CDC42BPBQ9Y5S2 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC35.9■■■■□ 3.34
CDC42BPBQ9Y5S2 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC35.9■■■■□ 3.34
CDC42BPBQ9Y5S2 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC35.9■■■■□ 3.34
CDC42BPBQ9Y5S2 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC35.9■■■■□ 3.34
CDC42BPBQ9Y5S2 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC35.9■■■■□ 3.34
CDC42BPBQ9Y5S2 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC35.89■■■■□ 3.34
CDC42BPBQ9Y5S2 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC35.89■■■■□ 3.34
CDC42BPBQ9Y5S2 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC35.88■■■■□ 3.34
CDC42BPBQ9Y5S2 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC35.88■■■■□ 3.33
CDC42BPBQ9Y5S2 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC35.88■■■■□ 3.33
CDC42BPBQ9Y5S2 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC35.88■■■■□ 3.33
CDC42BPBQ9Y5S2 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC35.88■■■■□ 3.33
CDC42BPBQ9Y5S2 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC35.88■■■■□ 3.33
CDC42BPBQ9Y5S2 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC35.88■■■■□ 3.33
CDC42BPBQ9Y5S2 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC35.87■■■■□ 3.33
CDC42BPBQ9Y5S2 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC35.87■■■■□ 3.33
CDC42BPBQ9Y5S2 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC35.87■■■■□ 3.33
CDC42BPBQ9Y5S2 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC35.87■■■■□ 3.33
CDC42BPBQ9Y5S2 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC35.87■■■■□ 3.33
CDC42BPBQ9Y5S2 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC35.87■■■■□ 3.33
CDC42BPBQ9Y5S2 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC35.86■■■■□ 3.33
CDC42BPBQ9Y5S2 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC35.86■■■■□ 3.33
CDC42BPBQ9Y5S2 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC35.86■■■■□ 3.33
CDC42BPBQ9Y5S2 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC35.86■■■■□ 3.33
CDC42BPBQ9Y5S2 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC35.86■■■■□ 3.33
CDC42BPBQ9Y5S2 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC35.86■■■■□ 3.33
CDC42BPBQ9Y5S2 EDA-201ENST00000338901 1233 ntBASIC35.86■■■■□ 3.33
CDC42BPBQ9Y5S2 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC35.85■■■■□ 3.33
CDC42BPBQ9Y5S2 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC35.85■■■■□ 3.33
CDC42BPBQ9Y5S2 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC35.85■■■■□ 3.33
CDC42BPBQ9Y5S2 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC35.85■■■■□ 3.33
CDC42BPBQ9Y5S2 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC35.85■■■■□ 3.33
CDC42BPBQ9Y5S2 AC105265.2-201ENST00000467189 838 ntBASIC35.84■■■■□ 3.33
CDC42BPBQ9Y5S2 AP001330.3-201ENST00000520123 633 ntBASIC35.84■■■■□ 3.33
CDC42BPBQ9Y5S2 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC35.84■■■■□ 3.33
CDC42BPBQ9Y5S2 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC35.83■■■■□ 3.33
CDC42BPBQ9Y5S2 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC35.83■■■■□ 3.33
CDC42BPBQ9Y5S2 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC35.83■■■■□ 3.33
CDC42BPBQ9Y5S2 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC35.83■■■■□ 3.33
CDC42BPBQ9Y5S2 ERN1-208ENST00000606895 2068 ntBASIC35.82■■■■□ 3.32
CDC42BPBQ9Y5S2 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC35.82■■■■□ 3.32
CDC42BPBQ9Y5S2 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC35.82■■■■□ 3.32
CDC42BPBQ9Y5S2 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC35.81■■■■□ 3.32
CDC42BPBQ9Y5S2 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC35.81■■■■□ 3.32
CDC42BPBQ9Y5S2 GATM-206ENST00000558336 1522 ntTSL 2 BASIC35.81■■■■□ 3.32
CDC42BPBQ9Y5S2 SF1-220ENST00000626028 704 ntTSL 2 BASIC35.8■■■■□ 3.32
CDC42BPBQ9Y5S2 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC35.8■■■■□ 3.32
CDC42BPBQ9Y5S2 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC35.8■■■■□ 3.32
CDC42BPBQ9Y5S2 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC35.8■■■■□ 3.32
CDC42BPBQ9Y5S2 AC104564.3-201ENST00000582367 638 ntBASIC35.8■■■■□ 3.32
CDC42BPBQ9Y5S2 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC35.8■■■■□ 3.32
CDC42BPBQ9Y5S2 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC35.79■■■■□ 3.32
CDC42BPBQ9Y5S2 AC097639.1-201ENST00000565519 1891 ntBASIC35.79■■■■□ 3.32
CDC42BPBQ9Y5S2 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC35.79■■■■□ 3.32
CDC42BPBQ9Y5S2 MIR939-201ENST00000401314 82 ntBASIC35.79■■■■□ 3.32
CDC42BPBQ9Y5S2 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC35.79■■■■□ 3.32
CDC42BPBQ9Y5S2 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC35.78■■■■□ 3.32
CDC42BPBQ9Y5S2 AF213884.3-201ENST00000563833 479 ntBASIC35.78■■■■□ 3.32
CDC42BPBQ9Y5S2 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC35.77■■■■□ 3.32
CDC42BPBQ9Y5S2 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC35.77■■■■□ 3.32
CDC42BPBQ9Y5S2 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC35.77■■■■□ 3.32
CDC42BPBQ9Y5S2 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC35.77■■■■□ 3.32
CDC42BPBQ9Y5S2 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC35.77■■■■□ 3.32
CDC42BPBQ9Y5S2 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC35.77■■■■□ 3.32
CDC42BPBQ9Y5S2 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC35.77■■■■□ 3.32
CDC42BPBQ9Y5S2 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC35.77■■■■□ 3.32
CDC42BPBQ9Y5S2 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC35.76■■■■□ 3.32
CDC42BPBQ9Y5S2 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC35.76■■■■□ 3.32
CDC42BPBQ9Y5S2 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC35.76■■■■□ 3.31
CDC42BPBQ9Y5S2 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC35.76■■■■□ 3.31
CDC42BPBQ9Y5S2 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC35.76■■■■□ 3.31
CDC42BPBQ9Y5S2 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC35.76■■■■□ 3.31
CDC42BPBQ9Y5S2 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC35.76■■■■□ 3.31
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms