Protein–RNA interactions for Protein: Q9Y5H7

PCDHA5, Protocadherin alpha-5, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA5Q9Y5H7 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
PCDHA5Q9Y5H7 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
PCDHA5Q9Y5H7 ABCB10P4-201ENST00000566803 2184 ntBASIC26.15■■□□□ 1.78
PCDHA5Q9Y5H7 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
PCDHA5Q9Y5H7 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
PCDHA5Q9Y5H7 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
PCDHA5Q9Y5H7 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC26.14■■□□□ 1.78
PCDHA5Q9Y5H7 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC26.14■■□□□ 1.78
PCDHA5Q9Y5H7 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC26.14■■□□□ 1.78
PCDHA5Q9Y5H7 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
PCDHA5Q9Y5H7 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
PCDHA5Q9Y5H7 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
PCDHA5Q9Y5H7 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC26.14■■□□□ 1.78
PCDHA5Q9Y5H7 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.78
PCDHA5Q9Y5H7 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.78
PCDHA5Q9Y5H7 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC26.14■■□□□ 1.77
PCDHA5Q9Y5H7 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC26.14■■□□□ 1.77
PCDHA5Q9Y5H7 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC26.14■■□□□ 1.77
PCDHA5Q9Y5H7 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
PCDHA5Q9Y5H7 SHD-204ENST00000599689 1729 ntTSL 5 BASIC26.14■■□□□ 1.77
PCDHA5Q9Y5H7 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
PCDHA5Q9Y5H7 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
PCDHA5Q9Y5H7 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
PCDHA5Q9Y5H7 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC26.13■■□□□ 1.77
PCDHA5Q9Y5H7 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
PCDHA5Q9Y5H7 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC26.13■■□□□ 1.77
PCDHA5Q9Y5H7 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC26.13■■□□□ 1.77
PCDHA5Q9Y5H7 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC26.12■■□□□ 1.77
PCDHA5Q9Y5H7 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
PCDHA5Q9Y5H7 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC26.12■■□□□ 1.77
PCDHA5Q9Y5H7 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC26.11■■□□□ 1.77
PCDHA5Q9Y5H7 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
PCDHA5Q9Y5H7 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
PCDHA5Q9Y5H7 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
PCDHA5Q9Y5H7 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC26.11■■□□□ 1.77
PCDHA5Q9Y5H7 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
PCDHA5Q9Y5H7 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
PCDHA5Q9Y5H7 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC26.1■■□□□ 1.77
PCDHA5Q9Y5H7 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC26.1■■□□□ 1.77
PCDHA5Q9Y5H7 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC26.1■■□□□ 1.77
PCDHA5Q9Y5H7 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
PCDHA5Q9Y5H7 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
PCDHA5Q9Y5H7 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
PCDHA5Q9Y5H7 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC26.1■■□□□ 1.77
PCDHA5Q9Y5H7 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
PCDHA5Q9Y5H7 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
PCDHA5Q9Y5H7 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
PCDHA5Q9Y5H7 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
PCDHA5Q9Y5H7 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC26.09■■□□□ 1.77
PCDHA5Q9Y5H7 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
PCDHA5Q9Y5H7 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC26.08■■□□□ 1.77
PCDHA5Q9Y5H7 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC26.08■■□□□ 1.77
PCDHA5Q9Y5H7 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC26.08■■□□□ 1.77
PCDHA5Q9Y5H7 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
PCDHA5Q9Y5H7 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.76
PCDHA5Q9Y5H7 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC26.07■■□□□ 1.76
PCDHA5Q9Y5H7 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC26.07■■□□□ 1.76
PCDHA5Q9Y5H7 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC26.07■■□□□ 1.76
PCDHA5Q9Y5H7 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC26.07■■□□□ 1.76
PCDHA5Q9Y5H7 SPCS2P3-201ENST00000500401 656 ntBASIC26.07■■□□□ 1.76
PCDHA5Q9Y5H7 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC26.07■■□□□ 1.76
PCDHA5Q9Y5H7 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
PCDHA5Q9Y5H7 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
PCDHA5Q9Y5H7 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
PCDHA5Q9Y5H7 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC26.06■■□□□ 1.76
PCDHA5Q9Y5H7 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC26.06■■□□□ 1.76
PCDHA5Q9Y5H7 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
PCDHA5Q9Y5H7 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC26.06■■□□□ 1.76
PCDHA5Q9Y5H7 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
PCDHA5Q9Y5H7 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
PCDHA5Q9Y5H7 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
PCDHA5Q9Y5H7 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC26.05■■□□□ 1.76
PCDHA5Q9Y5H7 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC26.05■■□□□ 1.76
PCDHA5Q9Y5H7 AL592293.1-201ENST00000502889 1188 ntBASIC26.05■■□□□ 1.76
PCDHA5Q9Y5H7 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
PCDHA5Q9Y5H7 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC26.05■■□□□ 1.76
PCDHA5Q9Y5H7 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC26.05■■□□□ 1.76
PCDHA5Q9Y5H7 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC26.05■■□□□ 1.76
PCDHA5Q9Y5H7 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
PCDHA5Q9Y5H7 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC26.04■■□□□ 1.76
PCDHA5Q9Y5H7 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC26.04■■□□□ 1.76
PCDHA5Q9Y5H7 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC26.04■■□□□ 1.76
PCDHA5Q9Y5H7 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
PCDHA5Q9Y5H7 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
PCDHA5Q9Y5H7 RPS2P7-201ENST00000447334 885 ntBASIC26.04■■□□□ 1.76
PCDHA5Q9Y5H7 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
PCDHA5Q9Y5H7 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC26.04■■□□□ 1.76
PCDHA5Q9Y5H7 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC26.04■■□□□ 1.76
PCDHA5Q9Y5H7 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC26.04■■□□□ 1.76
PCDHA5Q9Y5H7 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC26.04■■□□□ 1.76
PCDHA5Q9Y5H7 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
PCDHA5Q9Y5H7 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC26.04■■□□□ 1.76
PCDHA5Q9Y5H7 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC26.04■■□□□ 1.76
PCDHA5Q9Y5H7 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
PCDHA5Q9Y5H7 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC26.03■■□□□ 1.76
PCDHA5Q9Y5H7 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
PCDHA5Q9Y5H7 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
PCDHA5Q9Y5H7 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
PCDHA5Q9Y5H7 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
PCDHA5Q9Y5H7 ABHD17AP5-201ENST00000580133 923 ntBASIC26.02■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms