Protein–RNA interactions for Protein: Q9Y4Z0

LSM4, U6 snRNA-associated Sm-like protein LSm4, humanhuman

Known RBP Predictions only

Length 139 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4Q9Y4Z0 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC18.61■□□□□ 0.57
LSM4Q9Y4Z0 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LSM4Q9Y4Z0 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC18.61■□□□□ 0.57
LSM4Q9Y4Z0 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LSM4Q9Y4Z0 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
LSM4Q9Y4Z0 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
LSM4Q9Y4Z0 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LSM4Q9Y4Z0 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LSM4Q9Y4Z0 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
LSM4Q9Y4Z0 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC18.6■□□□□ 0.57
LSM4Q9Y4Z0 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LSM4Q9Y4Z0 SMPD5-203ENST00000639008 1464 ntBASIC18.6■□□□□ 0.57
LSM4Q9Y4Z0 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
LSM4Q9Y4Z0 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC18.6■□□□□ 0.57
LSM4Q9Y4Z0 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC18.6■□□□□ 0.57
LSM4Q9Y4Z0 HES4-204ENST00000484667 667 ntTSL 3 BASIC18.6■□□□□ 0.57
LSM4Q9Y4Z0 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC18.6■□□□□ 0.57
LSM4Q9Y4Z0 DUX4L18-201ENST00000553347 1267 ntBASIC18.6■□□□□ 0.57
LSM4Q9Y4Z0 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LSM4Q9Y4Z0 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LSM4Q9Y4Z0 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC18.6■□□□□ 0.57
LSM4Q9Y4Z0 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LSM4Q9Y4Z0 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LSM4Q9Y4Z0 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LSM4Q9Y4Z0 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LSM4Q9Y4Z0 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LSM4Q9Y4Z0 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
LSM4Q9Y4Z0 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LSM4Q9Y4Z0 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LSM4Q9Y4Z0 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LSM4Q9Y4Z0 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
LSM4Q9Y4Z0 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LSM4Q9Y4Z0 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LSM4Q9Y4Z0 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC18.59■□□□□ 0.57
LSM4Q9Y4Z0 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LSM4Q9Y4Z0 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LSM4Q9Y4Z0 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
LSM4Q9Y4Z0 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
LSM4Q9Y4Z0 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.57
LSM4Q9Y4Z0 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
LSM4Q9Y4Z0 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
LSM4Q9Y4Z0 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
LSM4Q9Y4Z0 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LSM4Q9Y4Z0 AC004812.2-201ENST00000611079 2094 ntBASIC18.58■□□□□ 0.56
LSM4Q9Y4Z0 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LSM4Q9Y4Z0 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LSM4Q9Y4Z0 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LSM4Q9Y4Z0 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
LSM4Q9Y4Z0 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LSM4Q9Y4Z0 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC18.57■□□□□ 0.56
LSM4Q9Y4Z0 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LSM4Q9Y4Z0 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
LSM4Q9Y4Z0 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LSM4Q9Y4Z0 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC18.57■□□□□ 0.56
LSM4Q9Y4Z0 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC18.57■□□□□ 0.56
LSM4Q9Y4Z0 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC18.56■□□□□ 0.56
LSM4Q9Y4Z0 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC18.56■□□□□ 0.56
LSM4Q9Y4Z0 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
LSM4Q9Y4Z0 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LSM4Q9Y4Z0 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
LSM4Q9Y4Z0 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
LSM4Q9Y4Z0 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
LSM4Q9Y4Z0 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC18.56■□□□□ 0.56
LSM4Q9Y4Z0 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC18.56■□□□□ 0.56
LSM4Q9Y4Z0 AC026202.3-201ENST00000600805 1127 ntBASIC18.56■□□□□ 0.56
LSM4Q9Y4Z0 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LSM4Q9Y4Z0 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
LSM4Q9Y4Z0 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
LSM4Q9Y4Z0 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC18.56■□□□□ 0.56
LSM4Q9Y4Z0 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
LSM4Q9Y4Z0 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LSM4Q9Y4Z0 DUSP8P5-201ENST00000422884 1815 ntBASIC18.56■□□□□ 0.56
LSM4Q9Y4Z0 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LSM4Q9Y4Z0 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC18.55■□□□□ 0.56
LSM4Q9Y4Z0 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC18.55■□□□□ 0.56
LSM4Q9Y4Z0 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LSM4Q9Y4Z0 MIR6089-201ENST00000616698 64 ntBASIC18.55■□□□□ 0.56
LSM4Q9Y4Z0 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC18.55■□□□□ 0.56
LSM4Q9Y4Z0 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
LSM4Q9Y4Z0 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LSM4Q9Y4Z0 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LSM4Q9Y4Z0 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LSM4Q9Y4Z0 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
LSM4Q9Y4Z0 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LSM4Q9Y4Z0 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
LSM4Q9Y4Z0 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC18.54■□□□□ 0.56
LSM4Q9Y4Z0 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LSM4Q9Y4Z0 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC18.54■□□□□ 0.56
LSM4Q9Y4Z0 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LSM4Q9Y4Z0 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC18.53■□□□□ 0.56
LSM4Q9Y4Z0 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LSM4Q9Y4Z0 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LSM4Q9Y4Z0 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
LSM4Q9Y4Z0 AC025884.2-201ENST00000553429 711 ntBASIC18.53■□□□□ 0.56
LSM4Q9Y4Z0 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LSM4Q9Y4Z0 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LSM4Q9Y4Z0 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LSM4Q9Y4Z0 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LSM4Q9Y4Z0 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LSM4Q9Y4Z0 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms