Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC32.25■■■□□ 2.75
NINLQ9Y2I6 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
NINLQ9Y2I6 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC32.24■■■□□ 2.75
NINLQ9Y2I6 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC32.24■■■□□ 2.75
NINLQ9Y2I6 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC32.24■■■□□ 2.75
NINLQ9Y2I6 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC32.24■■■□□ 2.75
NINLQ9Y2I6 AC010997.5-201ENST00000609182 354 ntBASIC32.24■■■□□ 2.75
NINLQ9Y2I6 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
NINLQ9Y2I6 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC32.23■■■□□ 2.75
NINLQ9Y2I6 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC32.23■■■□□ 2.75
NINLQ9Y2I6 SNX5-217ENST00000606557 1087 ntBASIC32.23■■■□□ 2.75
NINLQ9Y2I6 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC32.23■■■□□ 2.75
NINLQ9Y2I6 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
NINLQ9Y2I6 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC32.22■■■□□ 2.75
NINLQ9Y2I6 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC32.22■■■□□ 2.75
NINLQ9Y2I6 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC32.22■■■□□ 2.75
NINLQ9Y2I6 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC32.22■■■□□ 2.75
NINLQ9Y2I6 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC32.21■■■□□ 2.75
NINLQ9Y2I6 MIR6724-1-201ENST00000616420 92 ntBASIC32.21■■■□□ 2.75
NINLQ9Y2I6 MIR6724-2-201ENST00000616483 92 ntBASIC32.21■■■□□ 2.75
NINLQ9Y2I6 MIR6724-4-201ENST00000617390 92 ntBASIC32.21■■■□□ 2.75
NINLQ9Y2I6 MIR6724-3-201ENST00000622482 92 ntBASIC32.21■■■□□ 2.75
NINLQ9Y2I6 EXOG-217ENST00000630638 197 ntTSL 5 BASIC32.21■■■□□ 2.75
NINLQ9Y2I6 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
NINLQ9Y2I6 CREM-210ENST00000374721 2020 ntTSL 5 BASIC32.21■■■□□ 2.75
NINLQ9Y2I6 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC32.2■■■□□ 2.75
NINLQ9Y2I6 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC32.2■■■□□ 2.75
NINLQ9Y2I6 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
NINLQ9Y2I6 LSM4-201ENST00000252816 986 ntTSL 2 BASIC32.19■■■□□ 2.74
NINLQ9Y2I6 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC32.19■■■□□ 2.74
NINLQ9Y2I6 PEMT-206ENST00000435340 960 ntTSL 5 BASIC32.19■■■□□ 2.74
NINLQ9Y2I6 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC32.19■■■□□ 2.74
NINLQ9Y2I6 AL117332.1-201ENST00000622628 974 ntBASIC32.19■■■□□ 2.74
NINLQ9Y2I6 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
NINLQ9Y2I6 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC32.18■■■□□ 2.74
NINLQ9Y2I6 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC32.18■■■□□ 2.74
NINLQ9Y2I6 CLTA-210ENST00000540080 989 ntTSL 2 BASIC32.18■■■□□ 2.74
NINLQ9Y2I6 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC32.18■■■□□ 2.74
NINLQ9Y2I6 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
NINLQ9Y2I6 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC32.17■■■□□ 2.74
NINLQ9Y2I6 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC32.17■■■□□ 2.74
NINLQ9Y2I6 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC32.17■■■□□ 2.74
NINLQ9Y2I6 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC32.16■■■□□ 2.74
NINLQ9Y2I6 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC32.16■■■□□ 2.74
NINLQ9Y2I6 LBH-205ENST00000407930 756 ntTSL 2 BASIC32.16■■■□□ 2.74
NINLQ9Y2I6 SLC6A10P-202ENST00000431994 2058 ntBASIC32.15■■■□□ 2.74
NINLQ9Y2I6 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC32.15■■■□□ 2.74
NINLQ9Y2I6 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
NINLQ9Y2I6 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC32.15■■■□□ 2.74
NINLQ9Y2I6 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC32.14■■■□□ 2.74
NINLQ9Y2I6 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC32.14■■■□□ 2.74
NINLQ9Y2I6 MIR3621-201ENST00000580529 85 ntBASIC32.14■■■□□ 2.74
NINLQ9Y2I6 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC32.13■■■□□ 2.73
NINLQ9Y2I6 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC32.13■■■□□ 2.73
NINLQ9Y2I6 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
NINLQ9Y2I6 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC32.13■■■□□ 2.73
NINLQ9Y2I6 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC32.13■■■□□ 2.73
NINLQ9Y2I6 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC32.13■■■□□ 2.73
NINLQ9Y2I6 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC32.12■■■□□ 2.73
NINLQ9Y2I6 MIR6722-201ENST00000617286 78 ntBASIC32.12■■■□□ 2.73
NINLQ9Y2I6 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC32.12■■■□□ 2.73
NINLQ9Y2I6 AC131281.2-201ENST00000520478 145 ntBASIC32.11■■■□□ 2.73
NINLQ9Y2I6 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC32.11■■■□□ 2.73
NINLQ9Y2I6 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC32.1■■■□□ 2.73
NINLQ9Y2I6 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
NINLQ9Y2I6 CD72-202ENST00000378430 585 ntTSL 3 BASIC32.1■■■□□ 2.73
NINLQ9Y2I6 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
NINLQ9Y2I6 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC32.09■■■□□ 2.73
NINLQ9Y2I6 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC32.09■■■□□ 2.73
NINLQ9Y2I6 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC32.09■■■□□ 2.73
NINLQ9Y2I6 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC32.09■■■□□ 2.73
NINLQ9Y2I6 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC32.09■■■□□ 2.73
NINLQ9Y2I6 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC32.09■■■□□ 2.73
NINLQ9Y2I6 RPP21-222ENST00000433076 577 ntTSL 2 BASIC32.08■■■□□ 2.73
NINLQ9Y2I6 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC32.08■■■□□ 2.73
NINLQ9Y2I6 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC32.08■■■□□ 2.73
NINLQ9Y2I6 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC32.07■■■□□ 2.73
NINLQ9Y2I6 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC32.07■■■□□ 2.72
NINLQ9Y2I6 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC32.07■■■□□ 2.72
NINLQ9Y2I6 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC32.07■■■□□ 2.72
NINLQ9Y2I6 TFPT-201ENST00000391757 774 ntTSL 5 BASIC32.07■■■□□ 2.72
NINLQ9Y2I6 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC32.07■■■□□ 2.72
NINLQ9Y2I6 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC32.07■■■□□ 2.72
NINLQ9Y2I6 CLTA-206ENST00000466396 695 ntTSL 2 BASIC32.07■■■□□ 2.72
NINLQ9Y2I6 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC32.07■■■□□ 2.72
NINLQ9Y2I6 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
NINLQ9Y2I6 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC32.06■■■□□ 2.72
NINLQ9Y2I6 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
NINLQ9Y2I6 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
NINLQ9Y2I6 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC32.05■■■□□ 2.72
NINLQ9Y2I6 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
NINLQ9Y2I6 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC32.05■■■□□ 2.72
NINLQ9Y2I6 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC32.05■■■□□ 2.72
NINLQ9Y2I6 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC32.05■■■□□ 2.72
NINLQ9Y2I6 CEBPA-AS1-201ENST00000592982 2198 ntBASIC32.04■■■□□ 2.72
NINLQ9Y2I6 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
NINLQ9Y2I6 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC32.04■■■□□ 2.72
NINLQ9Y2I6 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC32.04■■■□□ 2.72
NINLQ9Y2I6 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC32.04■■■□□ 2.72
NINLQ9Y2I6 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC32.04■■■□□ 2.72
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms