Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NOTCH3Q9UM47 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NOTCH3Q9UM47 RASSF1-AS1-201ENST00000629828 790 ntBASIC17.9■□□□□ 0.46
NOTCH3Q9UM47 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NOTCH3Q9UM47 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
NOTCH3Q9UM47 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
NOTCH3Q9UM47 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC17.89■□□□□ 0.46
NOTCH3Q9UM47 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC17.89■□□□□ 0.45
NOTCH3Q9UM47 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
NOTCH3Q9UM47 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NOTCH3Q9UM47 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC17.89■□□□□ 0.45
NOTCH3Q9UM47 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
NOTCH3Q9UM47 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
NOTCH3Q9UM47 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NOTCH3Q9UM47 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC17.88■□□□□ 0.45
NOTCH3Q9UM47 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NOTCH3Q9UM47 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NOTCH3Q9UM47 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NOTCH3Q9UM47 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NOTCH3Q9UM47 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC17.88■□□□□ 0.45
NOTCH3Q9UM47 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NOTCH3Q9UM47 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC17.88■□□□□ 0.45
NOTCH3Q9UM47 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
NOTCH3Q9UM47 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC17.87■□□□□ 0.45
NOTCH3Q9UM47 AL031432.3-201ENST00000607698 485 ntBASIC17.87■□□□□ 0.45
NOTCH3Q9UM47 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NOTCH3Q9UM47 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NOTCH3Q9UM47 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
NOTCH3Q9UM47 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
NOTCH3Q9UM47 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC17.87■□□□□ 0.45
NOTCH3Q9UM47 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
NOTCH3Q9UM47 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NOTCH3Q9UM47 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
NOTCH3Q9UM47 TFPT-201ENST00000391757 774 ntTSL 5 BASIC17.86■□□□□ 0.45
NOTCH3Q9UM47 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
NOTCH3Q9UM47 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC17.86■□□□□ 0.45
NOTCH3Q9UM47 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NOTCH3Q9UM47 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC17.86■□□□□ 0.45
NOTCH3Q9UM47 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC17.86■□□□□ 0.45
NOTCH3Q9UM47 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC17.86■□□□□ 0.45
NOTCH3Q9UM47 AC142472.1-201ENST00000612013 1741 ntBASIC17.85■□□□□ 0.45
NOTCH3Q9UM47 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
NOTCH3Q9UM47 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NOTCH3Q9UM47 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
NOTCH3Q9UM47 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NOTCH3Q9UM47 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NOTCH3Q9UM47 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC17.85■□□□□ 0.45
NOTCH3Q9UM47 AC142381.2-201ENST00000566120 298 ntBASIC17.85■□□□□ 0.45
NOTCH3Q9UM47 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
NOTCH3Q9UM47 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC17.85■□□□□ 0.45
NOTCH3Q9UM47 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
NOTCH3Q9UM47 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NOTCH3Q9UM47 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC17.84■□□□□ 0.45
NOTCH3Q9UM47 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NOTCH3Q9UM47 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
NOTCH3Q9UM47 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC17.84■□□□□ 0.45
NOTCH3Q9UM47 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC17.84■□□□□ 0.45
NOTCH3Q9UM47 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC17.84■□□□□ 0.45
NOTCH3Q9UM47 RARRES2P6-201ENST00000567333 442 ntBASIC17.84■□□□□ 0.45
NOTCH3Q9UM47 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
NOTCH3Q9UM47 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
NOTCH3Q9UM47 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NOTCH3Q9UM47 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
NOTCH3Q9UM47 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC17.83■□□□□ 0.45
NOTCH3Q9UM47 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC17.83■□□□□ 0.45
NOTCH3Q9UM47 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.45
NOTCH3Q9UM47 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC17.83■□□□□ 0.44
NOTCH3Q9UM47 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NOTCH3Q9UM47 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NOTCH3Q9UM47 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NOTCH3Q9UM47 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC17.83■□□□□ 0.44
NOTCH3Q9UM47 CLTA-210ENST00000540080 989 ntTSL 2 BASIC17.83■□□□□ 0.44
NOTCH3Q9UM47 GAK-223ENST00000628912 497 ntTSL 5 BASIC17.83■□□□□ 0.44
NOTCH3Q9UM47 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
NOTCH3Q9UM47 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
NOTCH3Q9UM47 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NOTCH3Q9UM47 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
NOTCH3Q9UM47 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NOTCH3Q9UM47 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC17.82■□□□□ 0.44
NOTCH3Q9UM47 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NOTCH3Q9UM47 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
NOTCH3Q9UM47 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
NOTCH3Q9UM47 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NOTCH3Q9UM47 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NOTCH3Q9UM47 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NOTCH3Q9UM47 AK3-203ENST00000447596 705 ntTSL 2 BASIC17.81■□□□□ 0.44
NOTCH3Q9UM47 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NOTCH3Q9UM47 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NOTCH3Q9UM47 AC142086.6-201ENST00000621154 1765 ntBASIC17.81■□□□□ 0.44
NOTCH3Q9UM47 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NOTCH3Q9UM47 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC17.81■□□□□ 0.44
NOTCH3Q9UM47 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC17.81■□□□□ 0.44
NOTCH3Q9UM47 AF213884.3-201ENST00000563833 479 ntBASIC17.81■□□□□ 0.44
NOTCH3Q9UM47 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC17.81■□□□□ 0.44
NOTCH3Q9UM47 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC17.81■□□□□ 0.44
NOTCH3Q9UM47 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
NOTCH3Q9UM47 GUK1-205ENST00000366722 850 ntTSL 3 BASIC17.8■□□□□ 0.44
NOTCH3Q9UM47 CD72-202ENST00000378430 585 ntTSL 3 BASIC17.8■□□□□ 0.44
NOTCH3Q9UM47 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
NOTCH3Q9UM47 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms