Protein–RNA interactions for Protein: Q9UJJ7

RPUSD1, RNA pseudouridylate synthase domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1Q9UJJ7 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
RPUSD1Q9UJJ7 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RPUSD1Q9UJJ7 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RPUSD1Q9UJJ7 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC19.4■□□□□ 0.7
RPUSD1Q9UJJ7 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RPUSD1Q9UJJ7 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC19.4■□□□□ 0.7
RPUSD1Q9UJJ7 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
RPUSD1Q9UJJ7 AL035685.1-201ENST00000636663 812 ntBASIC19.4■□□□□ 0.7
RPUSD1Q9UJJ7 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RPUSD1Q9UJJ7 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RPUSD1Q9UJJ7 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC19.4■□□□□ 0.7
RPUSD1Q9UJJ7 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC19.4■□□□□ 0.7
RPUSD1Q9UJJ7 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
RPUSD1Q9UJJ7 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RPUSD1Q9UJJ7 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RPUSD1Q9UJJ7 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC19.39■□□□□ 0.69
RPUSD1Q9UJJ7 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RPUSD1Q9UJJ7 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC19.38■□□□□ 0.69
RPUSD1Q9UJJ7 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RPUSD1Q9UJJ7 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC19.38■□□□□ 0.69
RPUSD1Q9UJJ7 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
RPUSD1Q9UJJ7 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RPUSD1Q9UJJ7 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RPUSD1Q9UJJ7 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RPUSD1Q9UJJ7 AP003733.4-201ENST00000623785 1697 ntBASIC19.37■□□□□ 0.69
RPUSD1Q9UJJ7 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC19.37■□□□□ 0.69
RPUSD1Q9UJJ7 GAK-223ENST00000628912 497 ntTSL 5 BASIC19.37■□□□□ 0.69
RPUSD1Q9UJJ7 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
RPUSD1Q9UJJ7 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RPUSD1Q9UJJ7 AC090877.2-201ENST00000558441 1738 ntBASIC19.37■□□□□ 0.69
RPUSD1Q9UJJ7 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RPUSD1Q9UJJ7 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RPUSD1Q9UJJ7 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RPUSD1Q9UJJ7 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC19.36■□□□□ 0.69
RPUSD1Q9UJJ7 RNF146-205ENST00000477776 762 ntTSL 3 BASIC19.36■□□□□ 0.69
RPUSD1Q9UJJ7 MIR4281-201ENST00000580852 62 ntBASIC19.36■□□□□ 0.69
RPUSD1Q9UJJ7 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
RPUSD1Q9UJJ7 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
RPUSD1Q9UJJ7 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RPUSD1Q9UJJ7 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
RPUSD1Q9UJJ7 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC19.35■□□□□ 0.69
RPUSD1Q9UJJ7 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
RPUSD1Q9UJJ7 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC19.35■□□□□ 0.69
RPUSD1Q9UJJ7 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC19.35■□□□□ 0.69
RPUSD1Q9UJJ7 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RPUSD1Q9UJJ7 MIR6089-201ENST00000616698 64 ntBASIC19.35■□□□□ 0.69
RPUSD1Q9UJJ7 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
RPUSD1Q9UJJ7 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
RPUSD1Q9UJJ7 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
RPUSD1Q9UJJ7 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RPUSD1Q9UJJ7 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
RPUSD1Q9UJJ7 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
RPUSD1Q9UJJ7 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RPUSD1Q9UJJ7 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
RPUSD1Q9UJJ7 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
RPUSD1Q9UJJ7 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
RPUSD1Q9UJJ7 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
RPUSD1Q9UJJ7 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC19.33■□□□□ 0.68
RPUSD1Q9UJJ7 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RPUSD1Q9UJJ7 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
RPUSD1Q9UJJ7 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
RPUSD1Q9UJJ7 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RPUSD1Q9UJJ7 BX664725.1-201ENST00000438252 379 ntBASIC19.32■□□□□ 0.68
RPUSD1Q9UJJ7 Z92544.1-202ENST00000571933 1220 ntBASIC19.32■□□□□ 0.68
RPUSD1Q9UJJ7 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC19.32■□□□□ 0.68
RPUSD1Q9UJJ7 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
RPUSD1Q9UJJ7 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RPUSD1Q9UJJ7 TRIR-205ENST00000592273 783 ntTSL 3 BASIC19.32■□□□□ 0.68
RPUSD1Q9UJJ7 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RPUSD1Q9UJJ7 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC19.31■□□□□ 0.68
RPUSD1Q9UJJ7 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RPUSD1Q9UJJ7 AC137630.3-201ENST00000607245 391 ntBASIC19.31■□□□□ 0.68
RPUSD1Q9UJJ7 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC19.31■□□□□ 0.68
RPUSD1Q9UJJ7 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC19.31■□□□□ 0.68
RPUSD1Q9UJJ7 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC19.31■□□□□ 0.68
RPUSD1Q9UJJ7 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
RPUSD1Q9UJJ7 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RPUSD1Q9UJJ7 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RPUSD1Q9UJJ7 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RPUSD1Q9UJJ7 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RPUSD1Q9UJJ7 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RPUSD1Q9UJJ7 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RPUSD1Q9UJJ7 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
RPUSD1Q9UJJ7 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RPUSD1Q9UJJ7 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RPUSD1Q9UJJ7 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC19.29■□□□□ 0.68
RPUSD1Q9UJJ7 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RPUSD1Q9UJJ7 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC19.29■□□□□ 0.68
RPUSD1Q9UJJ7 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RPUSD1Q9UJJ7 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
RPUSD1Q9UJJ7 HES6-204ENST00000409182 863 ntTSL 2 BASIC19.29■□□□□ 0.68
RPUSD1Q9UJJ7 AC239859.2-201ENST00000444165 318 ntBASIC19.29■□□□□ 0.68
RPUSD1Q9UJJ7 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC19.29■□□□□ 0.68
RPUSD1Q9UJJ7 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC19.29■□□□□ 0.68
RPUSD1Q9UJJ7 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC19.29■□□□□ 0.68
RPUSD1Q9UJJ7 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
RPUSD1Q9UJJ7 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC19.29■□□□□ 0.68
RPUSD1Q9UJJ7 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RPUSD1Q9UJJ7 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RPUSD1Q9UJJ7 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms