Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 TK2-202ENST00000417693 1046 ntTSL 2 BASIC24.32■■□□□ 1.48
EBF3Q9H4W6 RPP21-222ENST00000433076 577 ntTSL 2 BASIC24.32■■□□□ 1.48
EBF3Q9H4W6 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
EBF3Q9H4W6 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
EBF3Q9H4W6 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
EBF3Q9H4W6 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC24.31■■□□□ 1.48
EBF3Q9H4W6 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC24.31■■□□□ 1.48
EBF3Q9H4W6 SSSCA1-AS1-201ENST00000567594 614 ntBASIC24.31■■□□□ 1.48
EBF3Q9H4W6 AL117332.1-201ENST00000622628 974 ntBASIC24.31■■□□□ 1.48
EBF3Q9H4W6 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
EBF3Q9H4W6 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC24.3■■□□□ 1.48
EBF3Q9H4W6 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC24.3■■□□□ 1.48
EBF3Q9H4W6 LSM4-201ENST00000252816 986 ntTSL 2 BASIC24.3■■□□□ 1.48
EBF3Q9H4W6 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
EBF3Q9H4W6 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC24.29■■□□□ 1.48
EBF3Q9H4W6 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC24.29■■□□□ 1.48
EBF3Q9H4W6 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC24.29■■□□□ 1.48
EBF3Q9H4W6 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC24.29■■□□□ 1.48
EBF3Q9H4W6 MIR6724-1-201ENST00000616420 92 ntBASIC24.29■■□□□ 1.48
EBF3Q9H4W6 MIR6724-2-201ENST00000616483 92 ntBASIC24.29■■□□□ 1.48
EBF3Q9H4W6 MIR6724-4-201ENST00000617390 92 ntBASIC24.29■■□□□ 1.48
EBF3Q9H4W6 MIR6724-3-201ENST00000622482 92 ntBASIC24.29■■□□□ 1.48
EBF3Q9H4W6 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
EBF3Q9H4W6 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC24.29■■□□□ 1.48
EBF3Q9H4W6 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC24.29■■□□□ 1.48
EBF3Q9H4W6 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC24.29■■□□□ 1.48
EBF3Q9H4W6 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC24.28■■□□□ 1.48
EBF3Q9H4W6 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC24.28■■□□□ 1.48
EBF3Q9H4W6 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC24.28■■□□□ 1.48
EBF3Q9H4W6 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC24.28■■□□□ 1.48
EBF3Q9H4W6 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
EBF3Q9H4W6 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
EBF3Q9H4W6 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC24.28■■□□□ 1.48
EBF3Q9H4W6 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
EBF3Q9H4W6 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
EBF3Q9H4W6 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC24.27■■□□□ 1.48
EBF3Q9H4W6 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC24.27■■□□□ 1.48
EBF3Q9H4W6 AF131216.4-201ENST00000638924 1588 ntBASIC24.27■■□□□ 1.48
EBF3Q9H4W6 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
EBF3Q9H4W6 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC24.27■■□□□ 1.48
EBF3Q9H4W6 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
EBF3Q9H4W6 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
EBF3Q9H4W6 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
EBF3Q9H4W6 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC24.26■■□□□ 1.47
EBF3Q9H4W6 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC24.26■■□□□ 1.47
EBF3Q9H4W6 AL136116.3-201ENST00000402907 1138 ntBASIC24.26■■□□□ 1.47
EBF3Q9H4W6 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC24.26■■□□□ 1.47
EBF3Q9H4W6 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC24.26■■□□□ 1.47
EBF3Q9H4W6 CLTA-210ENST00000540080 989 ntTSL 2 BASIC24.26■■□□□ 1.47
EBF3Q9H4W6 MIR3621-201ENST00000580529 85 ntBASIC24.26■■□□□ 1.47
EBF3Q9H4W6 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
EBF3Q9H4W6 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
EBF3Q9H4W6 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC24.26■■□□□ 1.47
EBF3Q9H4W6 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC24.26■■□□□ 1.47
EBF3Q9H4W6 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC24.25■■□□□ 1.47
EBF3Q9H4W6 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC24.25■■□□□ 1.47
EBF3Q9H4W6 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
EBF3Q9H4W6 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC24.25■■□□□ 1.47
EBF3Q9H4W6 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
EBF3Q9H4W6 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
EBF3Q9H4W6 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
EBF3Q9H4W6 EXOG-217ENST00000630638 197 ntTSL 5 BASIC24.25■■□□□ 1.47
EBF3Q9H4W6 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC24.25■■□□□ 1.47
EBF3Q9H4W6 ERN1-208ENST00000606895 2068 ntBASIC24.25■■□□□ 1.47
EBF3Q9H4W6 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
EBF3Q9H4W6 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC24.24■■□□□ 1.47
EBF3Q9H4W6 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
EBF3Q9H4W6 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC24.24■■□□□ 1.47
EBF3Q9H4W6 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC24.24■■□□□ 1.47
EBF3Q9H4W6 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC24.24■■□□□ 1.47
EBF3Q9H4W6 MIR638-201ENST00000385237 100 ntBASIC24.23■■□□□ 1.47
EBF3Q9H4W6 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC24.23■■□□□ 1.47
EBF3Q9H4W6 NALT1-201ENST00000429224 738 ntTSL 5 BASIC24.23■■□□□ 1.47
EBF3Q9H4W6 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC24.23■■□□□ 1.47
EBF3Q9H4W6 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC24.23■■□□□ 1.47
EBF3Q9H4W6 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC24.23■■□□□ 1.47
EBF3Q9H4W6 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC24.23■■□□□ 1.47
EBF3Q9H4W6 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC24.23■■□□□ 1.47
EBF3Q9H4W6 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
EBF3Q9H4W6 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC24.23■■□□□ 1.47
EBF3Q9H4W6 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC24.23■■□□□ 1.47
EBF3Q9H4W6 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC24.23■■□□□ 1.47
EBF3Q9H4W6 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC24.22■■□□□ 1.47
EBF3Q9H4W6 AC096887.2-201ENST00000623443 1957 ntBASIC24.22■■□□□ 1.47
EBF3Q9H4W6 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
EBF3Q9H4W6 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
EBF3Q9H4W6 AL356740.2-201ENST00000601559 647 ntBASIC24.22■■□□□ 1.47
EBF3Q9H4W6 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC24.22■■□□□ 1.47
EBF3Q9H4W6 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC24.22■■□□□ 1.47
EBF3Q9H4W6 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC24.22■■□□□ 1.47
EBF3Q9H4W6 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC24.22■■□□□ 1.47
EBF3Q9H4W6 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC24.22■■□□□ 1.47
EBF3Q9H4W6 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC24.21■■□□□ 1.47
EBF3Q9H4W6 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
EBF3Q9H4W6 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
EBF3Q9H4W6 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC24.21■■□□□ 1.47
EBF3Q9H4W6 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
EBF3Q9H4W6 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC24.21■■□□□ 1.47
EBF3Q9H4W6 AL139246.5-201ENST00000606645 996 ntBASIC24.21■■□□□ 1.47
EBF3Q9H4W6 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms