Protein–RNA interactions for Protein: Q96M42

LINC00479, Putative uncharacterized protein encoded by LINC00479, humanhuman

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00479Q96M42 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC17.78■□□□□ 0.44
LINC00479Q96M42 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC17.78■□□□□ 0.44
LINC00479Q96M42 GALC-202ENST00000393568 2054 ntTSL 2 BASIC17.78■□□□□ 0.44
LINC00479Q96M42 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LINC00479Q96M42 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LINC00479Q96M42 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC17.77■□□□□ 0.44
LINC00479Q96M42 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LINC00479Q96M42 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
LINC00479Q96M42 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC17.77■□□□□ 0.44
LINC00479Q96M42 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LINC00479Q96M42 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC17.77■□□□□ 0.43
LINC00479Q96M42 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
LINC00479Q96M42 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
LINC00479Q96M42 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC17.76■□□□□ 0.43
LINC00479Q96M42 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC17.76■□□□□ 0.43
LINC00479Q96M42 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
LINC00479Q96M42 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC17.76■□□□□ 0.43
LINC00479Q96M42 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LINC00479Q96M42 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LINC00479Q96M42 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
LINC00479Q96M42 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
LINC00479Q96M42 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC17.76■□□□□ 0.43
LINC00479Q96M42 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
LINC00479Q96M42 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
LINC00479Q96M42 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
LINC00479Q96M42 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LINC00479Q96M42 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC17.75■□□□□ 0.43
LINC00479Q96M42 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
LINC00479Q96M42 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LINC00479Q96M42 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
LINC00479Q96M42 HLA-L-211ENST00000482052 1765 ntBASIC17.75■□□□□ 0.43
LINC00479Q96M42 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
LINC00479Q96M42 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LINC00479Q96M42 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC17.75■□□□□ 0.43
LINC00479Q96M42 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
LINC00479Q96M42 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC17.74■□□□□ 0.43
LINC00479Q96M42 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LINC00479Q96M42 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
LINC00479Q96M42 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LINC00479Q96M42 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
LINC00479Q96M42 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LINC00479Q96M42 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
LINC00479Q96M42 HES6-205ENST00000409356 528 ntTSL 2 BASIC17.74■□□□□ 0.43
LINC00479Q96M42 MIR6089-201ENST00000616698 64 ntBASIC17.74■□□□□ 0.43
LINC00479Q96M42 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LINC00479Q96M42 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
LINC00479Q96M42 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LINC00479Q96M42 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
LINC00479Q96M42 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
LINC00479Q96M42 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
LINC00479Q96M42 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
LINC00479Q96M42 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC17.73■□□□□ 0.43
LINC00479Q96M42 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LINC00479Q96M42 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LINC00479Q96M42 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LINC00479Q96M42 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LINC00479Q96M42 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
LINC00479Q96M42 DUX4L11-201ENST00000611504 1267 ntBASIC17.73■□□□□ 0.43
LINC00479Q96M42 DUX4L12-201ENST00000614593 1267 ntBASIC17.73■□□□□ 0.43
LINC00479Q96M42 DUX4L14-201ENST00000621227 1267 ntBASIC17.73■□□□□ 0.43
LINC00479Q96M42 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LINC00479Q96M42 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
LINC00479Q96M42 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC17.72■□□□□ 0.43
LINC00479Q96M42 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
LINC00479Q96M42 AL117328.2-201ENST00000624617 1940 ntBASIC17.72■□□□□ 0.43
LINC00479Q96M42 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
LINC00479Q96M42 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
LINC00479Q96M42 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LINC00479Q96M42 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LINC00479Q96M42 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
LINC00479Q96M42 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC17.71■□□□□ 0.43
LINC00479Q96M42 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC17.71■□□□□ 0.43
LINC00479Q96M42 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC17.71■□□□□ 0.43
LINC00479Q96M42 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC17.71■□□□□ 0.43
LINC00479Q96M42 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LINC00479Q96M42 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LINC00479Q96M42 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LINC00479Q96M42 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
LINC00479Q96M42 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LINC00479Q96M42 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
LINC00479Q96M42 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
LINC00479Q96M42 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC17.71■□□□□ 0.42
LINC00479Q96M42 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LINC00479Q96M42 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC17.7■□□□□ 0.42
LINC00479Q96M42 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LINC00479Q96M42 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LINC00479Q96M42 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
LINC00479Q96M42 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC17.7■□□□□ 0.42
LINC00479Q96M42 STK25-234ENST00000535007 2459 ntTSL 2 BASIC17.7■□□□□ 0.42
LINC00479Q96M42 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LINC00479Q96M42 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LINC00479Q96M42 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LINC00479Q96M42 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC17.7■□□□□ 0.42
LINC00479Q96M42 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LINC00479Q96M42 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LINC00479Q96M42 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LINC00479Q96M42 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
LINC00479Q96M42 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC17.69■□□□□ 0.42
LINC00479Q96M42 EP400NL-214ENST00000641289 2402 ntBASIC17.69■□□□□ 0.42
LINC00479Q96M42 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms