Protein–RNA interactions for Protein: Q96KR7

PHACTR3, Phosphatase and actin regulator 3, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR3Q96KR7 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC30.88■■■□□ 2.53
PHACTR3Q96KR7 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
PHACTR3Q96KR7 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
PHACTR3Q96KR7 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC30.88■■■□□ 2.53
PHACTR3Q96KR7 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
PHACTR3Q96KR7 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC30.87■■■□□ 2.53
PHACTR3Q96KR7 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC30.87■■■□□ 2.53
PHACTR3Q96KR7 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC30.87■■■□□ 2.53
PHACTR3Q96KR7 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC30.87■■■□□ 2.53
PHACTR3Q96KR7 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
PHACTR3Q96KR7 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC30.87■■■□□ 2.53
PHACTR3Q96KR7 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC30.87■■■□□ 2.53
PHACTR3Q96KR7 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC30.87■■■□□ 2.53
PHACTR3Q96KR7 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
PHACTR3Q96KR7 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC30.86■■■□□ 2.53
PHACTR3Q96KR7 TK2-202ENST00000417693 1046 ntTSL 2 BASIC30.86■■■□□ 2.53
PHACTR3Q96KR7 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC30.86■■■□□ 2.53
PHACTR3Q96KR7 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC30.86■■■□□ 2.53
PHACTR3Q96KR7 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
PHACTR3Q96KR7 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC30.86■■■□□ 2.53
PHACTR3Q96KR7 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
PHACTR3Q96KR7 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
PHACTR3Q96KR7 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
PHACTR3Q96KR7 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC30.85■■■□□ 2.53
PHACTR3Q96KR7 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC30.85■■■□□ 2.53
PHACTR3Q96KR7 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC30.85■■■□□ 2.53
PHACTR3Q96KR7 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC30.85■■■□□ 2.53
PHACTR3Q96KR7 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC30.85■■■□□ 2.53
PHACTR3Q96KR7 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC30.85■■■□□ 2.53
PHACTR3Q96KR7 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
PHACTR3Q96KR7 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
PHACTR3Q96KR7 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
PHACTR3Q96KR7 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC30.84■■■□□ 2.53
PHACTR3Q96KR7 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC30.84■■■□□ 2.53
PHACTR3Q96KR7 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
PHACTR3Q96KR7 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC30.83■■■□□ 2.53
PHACTR3Q96KR7 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC30.83■■■□□ 2.53
PHACTR3Q96KR7 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC30.83■■■□□ 2.53
PHACTR3Q96KR7 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC30.82■■■□□ 2.53
PHACTR3Q96KR7 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC30.82■■■□□ 2.52
PHACTR3Q96KR7 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC30.82■■■□□ 2.52
PHACTR3Q96KR7 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
PHACTR3Q96KR7 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC30.82■■■□□ 2.52
PHACTR3Q96KR7 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
PHACTR3Q96KR7 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
PHACTR3Q96KR7 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC30.81■■■□□ 2.52
PHACTR3Q96KR7 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC30.81■■■□□ 2.52
PHACTR3Q96KR7 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
PHACTR3Q96KR7 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC30.81■■■□□ 2.52
PHACTR3Q96KR7 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC30.81■■■□□ 2.52
PHACTR3Q96KR7 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
PHACTR3Q96KR7 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
PHACTR3Q96KR7 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC30.81■■■□□ 2.52
PHACTR3Q96KR7 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
PHACTR3Q96KR7 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
PHACTR3Q96KR7 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC30.8■■■□□ 2.52
PHACTR3Q96KR7 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
PHACTR3Q96KR7 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
PHACTR3Q96KR7 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
PHACTR3Q96KR7 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC30.8■■■□□ 2.52
PHACTR3Q96KR7 KRT16P3-201ENST00000439127 1283 ntBASIC30.8■■■□□ 2.52
PHACTR3Q96KR7 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
PHACTR3Q96KR7 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC30.79■■■□□ 2.52
PHACTR3Q96KR7 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
PHACTR3Q96KR7 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
PHACTR3Q96KR7 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
PHACTR3Q96KR7 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC30.78■■■□□ 2.52
PHACTR3Q96KR7 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC30.78■■■□□ 2.52
PHACTR3Q96KR7 CLTA-210ENST00000540080 989 ntTSL 2 BASIC30.78■■■□□ 2.52
PHACTR3Q96KR7 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC30.78■■■□□ 2.52
PHACTR3Q96KR7 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
PHACTR3Q96KR7 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC30.78■■■□□ 2.52
PHACTR3Q96KR7 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
PHACTR3Q96KR7 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
PHACTR3Q96KR7 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC30.77■■■□□ 2.52
PHACTR3Q96KR7 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
PHACTR3Q96KR7 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
PHACTR3Q96KR7 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC30.77■■■□□ 2.52
PHACTR3Q96KR7 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC30.77■■■□□ 2.52
PHACTR3Q96KR7 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC30.77■■■□□ 2.52
PHACTR3Q96KR7 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC30.77■■■□□ 2.52
PHACTR3Q96KR7 CREM-210ENST00000374721 2020 ntTSL 5 BASIC30.76■■■□□ 2.52
PHACTR3Q96KR7 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.52
PHACTR3Q96KR7 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC30.76■■■□□ 2.51
PHACTR3Q96KR7 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC30.76■■■□□ 2.51
PHACTR3Q96KR7 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
PHACTR3Q96KR7 MIR6089-201ENST00000616698 64 ntBASIC30.76■■■□□ 2.51
PHACTR3Q96KR7 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
PHACTR3Q96KR7 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC30.76■■■□□ 2.51
PHACTR3Q96KR7 LSM4-201ENST00000252816 986 ntTSL 2 BASIC30.75■■■□□ 2.51
PHACTR3Q96KR7 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
PHACTR3Q96KR7 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC30.75■■■□□ 2.51
PHACTR3Q96KR7 LSR-205ENST00000427250 1606 ntTSL 2 BASIC30.74■■■□□ 2.51
PHACTR3Q96KR7 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC30.74■■■□□ 2.51
PHACTR3Q96KR7 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC30.74■■■□□ 2.51
PHACTR3Q96KR7 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC30.74■■■□□ 2.51
PHACTR3Q96KR7 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC30.74■■■□□ 2.51
PHACTR3Q96KR7 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
PHACTR3Q96KR7 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
PHACTR3Q96KR7 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC30.73■■■□□ 2.51
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms