Protein–RNA interactions for Protein: Q96FL8

SLC47A1, Multidrug and toxin extrusion protein 1, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1Q96FL8 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SLC47A1Q96FL8 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC21.95■■□□□ 1.1
SLC47A1Q96FL8 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SLC47A1Q96FL8 SMPD5-203ENST00000639008 1464 ntBASIC21.95■■□□□ 1.1
SLC47A1Q96FL8 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SLC47A1Q96FL8 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
SLC47A1Q96FL8 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SLC47A1Q96FL8 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SLC47A1Q96FL8 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SLC47A1Q96FL8 MIR6089-201ENST00000616698 64 ntBASIC21.94■■□□□ 1.1
SLC47A1Q96FL8 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC21.94■■□□□ 1.1
SLC47A1Q96FL8 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SLC47A1Q96FL8 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC21.93■■□□□ 1.1
SLC47A1Q96FL8 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
SLC47A1Q96FL8 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
SLC47A1Q96FL8 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
SLC47A1Q96FL8 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
SLC47A1Q96FL8 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
SLC47A1Q96FL8 LSR-205ENST00000427250 1606 ntTSL 2 BASIC21.92■■□□□ 1.1
SLC47A1Q96FL8 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.92■■□□□ 1.1
SLC47A1Q96FL8 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SLC47A1Q96FL8 REST-210ENST00000638187 1334 ntTSL 5 BASIC21.92■■□□□ 1.1
SLC47A1Q96FL8 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SLC47A1Q96FL8 ECEL1P2-201ENST00000461596 1295 ntBASIC21.92■■□□□ 1.1
SLC47A1Q96FL8 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SLC47A1Q96FL8 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC21.91■■□□□ 1.1
SLC47A1Q96FL8 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
SLC47A1Q96FL8 MIR4449-201ENST00000578365 66 ntBASIC21.91■■□□□ 1.1
SLC47A1Q96FL8 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
SLC47A1Q96FL8 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SLC47A1Q96FL8 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC21.9■■□□□ 1.1
SLC47A1Q96FL8 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC21.9■■□□□ 1.1
SLC47A1Q96FL8 AC079834.2-201ENST00000609776 1949 ntBASIC21.9■■□□□ 1.1
SLC47A1Q96FL8 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
SLC47A1Q96FL8 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
SLC47A1Q96FL8 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.9■■□□□ 1.1
SLC47A1Q96FL8 CEP120-209ENST00000515110 606 ntTSL 3 BASIC21.9■■□□□ 1.1
SLC47A1Q96FL8 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC21.9■■□□□ 1.1
SLC47A1Q96FL8 ME2-208ENST00000638937 2471 ntTSL 5 BASIC21.89■■□□□ 1.1
SLC47A1Q96FL8 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.1
SLC47A1Q96FL8 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
SLC47A1Q96FL8 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
SLC47A1Q96FL8 MBP-237ENST00000579129 1052 ntTSL 5 BASIC21.89■■□□□ 1.09
SLC47A1Q96FL8 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SLC47A1Q96FL8 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
SLC47A1Q96FL8 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
SLC47A1Q96FL8 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.89■■□□□ 1.09
SLC47A1Q96FL8 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SLC47A1Q96FL8 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SLC47A1Q96FL8 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SLC47A1Q96FL8 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SLC47A1Q96FL8 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
SLC47A1Q96FL8 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC21.88■■□□□ 1.09
SLC47A1Q96FL8 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
SLC47A1Q96FL8 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SLC47A1Q96FL8 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
SLC47A1Q96FL8 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SLC47A1Q96FL8 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SLC47A1Q96FL8 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC21.87■■□□□ 1.09
SLC47A1Q96FL8 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SLC47A1Q96FL8 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SLC47A1Q96FL8 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SLC47A1Q96FL8 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SLC47A1Q96FL8 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SLC47A1Q96FL8 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
SLC47A1Q96FL8 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.85■■□□□ 1.09
SLC47A1Q96FL8 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
SLC47A1Q96FL8 HES4-202ENST00000428771 1040 ntTSL 2 BASIC21.85■■□□□ 1.09
SLC47A1Q96FL8 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC21.85■■□□□ 1.09
SLC47A1Q96FL8 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.85■■□□□ 1.09
SLC47A1Q96FL8 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
SLC47A1Q96FL8 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
SLC47A1Q96FL8 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC21.84■■□□□ 1.09
SLC47A1Q96FL8 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC21.84■■□□□ 1.09
SLC47A1Q96FL8 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SLC47A1Q96FL8 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC21.83■■□□□ 1.09
SLC47A1Q96FL8 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SLC47A1Q96FL8 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
SLC47A1Q96FL8 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
SLC47A1Q96FL8 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
SLC47A1Q96FL8 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC21.83■■□□□ 1.09
SLC47A1Q96FL8 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
SLC47A1Q96FL8 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
SLC47A1Q96FL8 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC21.83■■□□□ 1.08
SLC47A1Q96FL8 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
SLC47A1Q96FL8 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SLC47A1Q96FL8 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
SLC47A1Q96FL8 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SLC47A1Q96FL8 RP9P-202ENST00000450133 1212 ntBASIC21.82■■□□□ 1.08
SLC47A1Q96FL8 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
SLC47A1Q96FL8 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC21.82■■□□□ 1.08
SLC47A1Q96FL8 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
SLC47A1Q96FL8 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.81■■□□□ 1.08
SLC47A1Q96FL8 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SLC47A1Q96FL8 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SLC47A1Q96FL8 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SLC47A1Q96FL8 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
SLC47A1Q96FL8 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC21.81■■□□□ 1.08
SLC47A1Q96FL8 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SLC47A1Q96FL8 HLA-L-211ENST00000482052 1765 ntBASIC21.81■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms