Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HPS1Q92902 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC21■□□□□ 0.95
HPS1Q92902 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HPS1Q92902 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC21■□□□□ 0.95
HPS1Q92902 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HPS1Q92902 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HPS1Q92902 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HPS1Q92902 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
HPS1Q92902 LINC00565-201ENST00000562710 2331 ntBASIC21■□□□□ 0.95
HPS1Q92902 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HPS1Q92902 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
HPS1Q92902 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.99■□□□□ 0.95
HPS1Q92902 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
HPS1Q92902 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC20.99■□□□□ 0.95
HPS1Q92902 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
HPS1Q92902 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HPS1Q92902 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
HPS1Q92902 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.99■□□□□ 0.95
HPS1Q92902 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HPS1Q92902 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HPS1Q92902 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
HPS1Q92902 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
HPS1Q92902 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.98■□□□□ 0.95
HPS1Q92902 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.98■□□□□ 0.95
HPS1Q92902 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HPS1Q92902 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.98■□□□□ 0.95
HPS1Q92902 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.98■□□□□ 0.95
HPS1Q92902 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HPS1Q92902 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
HPS1Q92902 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HPS1Q92902 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
HPS1Q92902 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.98■□□□□ 0.95
HPS1Q92902 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
HPS1Q92902 AL117328.2-201ENST00000624617 1940 ntBASIC20.98■□□□□ 0.95
HPS1Q92902 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
HPS1Q92902 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
HPS1Q92902 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
HPS1Q92902 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
HPS1Q92902 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HPS1Q92902 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC20.97■□□□□ 0.95
HPS1Q92902 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HPS1Q92902 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC20.96■□□□□ 0.95
HPS1Q92902 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC20.96■□□□□ 0.95
HPS1Q92902 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
HPS1Q92902 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC20.96■□□□□ 0.95
HPS1Q92902 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
HPS1Q92902 WHAMMP3-201ENST00000611636 1609 ntBASIC20.96■□□□□ 0.95
HPS1Q92902 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
HPS1Q92902 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
HPS1Q92902 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
HPS1Q92902 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
HPS1Q92902 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.95■□□□□ 0.94
HPS1Q92902 AL359258.2-201ENST00000564063 1566 ntBASIC20.95■□□□□ 0.94
HPS1Q92902 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HPS1Q92902 U85056.1-201ENST00000616429 682 ntBASIC20.95■□□□□ 0.94
HPS1Q92902 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HPS1Q92902 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
HPS1Q92902 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
HPS1Q92902 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC20.95■□□□□ 0.94
HPS1Q92902 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
HPS1Q92902 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HPS1Q92902 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.94■□□□□ 0.94
HPS1Q92902 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HPS1Q92902 LINC01124-201ENST00000409786 2117 ntBASIC20.94■□□□□ 0.94
HPS1Q92902 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
HPS1Q92902 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.94■□□□□ 0.94
HPS1Q92902 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
HPS1Q92902 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HPS1Q92902 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HPS1Q92902 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
HPS1Q92902 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HPS1Q92902 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
HPS1Q92902 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
HPS1Q92902 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HPS1Q92902 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC20.93■□□□□ 0.94
HPS1Q92902 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HPS1Q92902 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
HPS1Q92902 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
HPS1Q92902 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
HPS1Q92902 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HPS1Q92902 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HPS1Q92902 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
HPS1Q92902 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HPS1Q92902 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC20.92■□□□□ 0.94
HPS1Q92902 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HPS1Q92902 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
HPS1Q92902 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
HPS1Q92902 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.92■□□□□ 0.94
HPS1Q92902 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.92■□□□□ 0.94
HPS1Q92902 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HPS1Q92902 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
HPS1Q92902 C9orf163-202ENST00000624034 2573 ntBASIC20.92■□□□□ 0.94
HPS1Q92902 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HPS1Q92902 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HPS1Q92902 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
HPS1Q92902 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
HPS1Q92902 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
HPS1Q92902 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HPS1Q92902 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
HPS1Q92902 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms