Protein–RNA interactions for Protein: Q92617

NPIPB3, Nuclear pore complex-interacting protein family member B3, humanhuman

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3Q92617 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC18.34■□□□□ 0.53
NPIPB3Q92617 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
NPIPB3Q92617 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC18.34■□□□□ 0.53
NPIPB3Q92617 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC18.34■□□□□ 0.53
NPIPB3Q92617 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC18.34■□□□□ 0.53
NPIPB3Q92617 GFER-205ENST00000569451 517 ntTSL 5 BASIC18.34■□□□□ 0.53
NPIPB3Q92617 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
NPIPB3Q92617 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
NPIPB3Q92617 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
NPIPB3Q92617 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC18.33■□□□□ 0.52
NPIPB3Q92617 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC18.33■□□□□ 0.52
NPIPB3Q92617 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
NPIPB3Q92617 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC18.33■□□□□ 0.52
NPIPB3Q92617 HLA-L-211ENST00000482052 1765 ntBASIC18.32■□□□□ 0.52
NPIPB3Q92617 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC18.32■□□□□ 0.52
NPIPB3Q92617 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NPIPB3Q92617 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NPIPB3Q92617 FOXO3B-201ENST00000395675 1928 ntBASIC18.32■□□□□ 0.52
NPIPB3Q92617 KRT18P10-201ENST00000388836 1287 ntBASIC18.32■□□□□ 0.52
NPIPB3Q92617 HES4-202ENST00000428771 1040 ntTSL 2 BASIC18.32■□□□□ 0.52
NPIPB3Q92617 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC18.32■□□□□ 0.52
NPIPB3Q92617 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC18.32■□□□□ 0.52
NPIPB3Q92617 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC18.32■□□□□ 0.52
NPIPB3Q92617 RAP2CP1-202ENST00000605179 643 ntBASIC18.32■□□□□ 0.52
NPIPB3Q92617 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NPIPB3Q92617 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NPIPB3Q92617 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC18.32■□□□□ 0.52
NPIPB3Q92617 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
NPIPB3Q92617 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NPIPB3Q92617 ABCB10P4-201ENST00000566803 2184 ntBASIC18.31■□□□□ 0.52
NPIPB3Q92617 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NPIPB3Q92617 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC18.31■□□□□ 0.52
NPIPB3Q92617 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
NPIPB3Q92617 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NPIPB3Q92617 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NPIPB3Q92617 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NPIPB3Q92617 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NPIPB3Q92617 AC026202.3-201ENST00000600805 1127 ntBASIC18.3■□□□□ 0.52
NPIPB3Q92617 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NPIPB3Q92617 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
NPIPB3Q92617 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC18.3■□□□□ 0.52
NPIPB3Q92617 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NPIPB3Q92617 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
NPIPB3Q92617 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC18.29■□□□□ 0.52
NPIPB3Q92617 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
NPIPB3Q92617 SHD-204ENST00000599689 1729 ntTSL 5 BASIC18.29■□□□□ 0.52
NPIPB3Q92617 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
NPIPB3Q92617 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NPIPB3Q92617 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NPIPB3Q92617 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NPIPB3Q92617 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC18.29■□□□□ 0.52
NPIPB3Q92617 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC18.29■□□□□ 0.52
NPIPB3Q92617 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NPIPB3Q92617 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NPIPB3Q92617 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NPIPB3Q92617 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NPIPB3Q92617 AC133561.1-201ENST00000568600 2415 ntBASIC18.28■□□□□ 0.52
NPIPB3Q92617 GPX1-201ENST00000419349 1106 ntBASIC18.28■□□□□ 0.52
NPIPB3Q92617 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC18.28■□□□□ 0.52
NPIPB3Q92617 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
NPIPB3Q92617 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
NPIPB3Q92617 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NPIPB3Q92617 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NPIPB3Q92617 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
NPIPB3Q92617 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC18.28■□□□□ 0.52
NPIPB3Q92617 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC18.27■□□□□ 0.52
NPIPB3Q92617 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NPIPB3Q92617 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NPIPB3Q92617 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
NPIPB3Q92617 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC18.27■□□□□ 0.52
NPIPB3Q92617 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
NPIPB3Q92617 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
NPIPB3Q92617 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
NPIPB3Q92617 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC18.27■□□□□ 0.52
NPIPB3Q92617 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
NPIPB3Q92617 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
NPIPB3Q92617 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
NPIPB3Q92617 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
NPIPB3Q92617 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
NPIPB3Q92617 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NPIPB3Q92617 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NPIPB3Q92617 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
NPIPB3Q92617 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NPIPB3Q92617 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC18.26■□□□□ 0.51
NPIPB3Q92617 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC18.26■□□□□ 0.51
NPIPB3Q92617 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NPIPB3Q92617 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
NPIPB3Q92617 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NPIPB3Q92617 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NPIPB3Q92617 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NPIPB3Q92617 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NPIPB3Q92617 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
NPIPB3Q92617 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NPIPB3Q92617 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
NPIPB3Q92617 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
NPIPB3Q92617 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC18.25■□□□□ 0.51
NPIPB3Q92617 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NPIPB3Q92617 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NPIPB3Q92617 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
NPIPB3Q92617 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms