Protein–RNA interactions for Protein: Q8WWY6

MBD3L1, Methyl-CpG-binding domain protein 3-like 1, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L1Q8WWY6 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
MBD3L1Q8WWY6 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC18.32■□□□□ 0.52
MBD3L1Q8WWY6 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MBD3L1Q8WWY6 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC18.31■□□□□ 0.52
MBD3L1Q8WWY6 LINC00526-201ENST00000581067 1875 ntBASIC18.31■□□□□ 0.52
MBD3L1Q8WWY6 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MBD3L1Q8WWY6 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MBD3L1Q8WWY6 CIB2-204ENST00000557846 934 ntTSL 3 BASIC18.31■□□□□ 0.52
MBD3L1Q8WWY6 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC18.31■□□□□ 0.52
MBD3L1Q8WWY6 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
MBD3L1Q8WWY6 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MBD3L1Q8WWY6 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
MBD3L1Q8WWY6 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
MBD3L1Q8WWY6 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MBD3L1Q8WWY6 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MBD3L1Q8WWY6 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
MBD3L1Q8WWY6 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MBD3L1Q8WWY6 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
MBD3L1Q8WWY6 HNRNPLP2-201ENST00000568980 1570 ntBASIC18.3■□□□□ 0.52
MBD3L1Q8WWY6 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MBD3L1Q8WWY6 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MBD3L1Q8WWY6 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
MBD3L1Q8WWY6 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC18.3■□□□□ 0.52
MBD3L1Q8WWY6 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MBD3L1Q8WWY6 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
MBD3L1Q8WWY6 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
MBD3L1Q8WWY6 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
MBD3L1Q8WWY6 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
MBD3L1Q8WWY6 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MBD3L1Q8WWY6 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MBD3L1Q8WWY6 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
MBD3L1Q8WWY6 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
MBD3L1Q8WWY6 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
MBD3L1Q8WWY6 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC18.29■□□□□ 0.52
MBD3L1Q8WWY6 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC18.29■□□□□ 0.52
MBD3L1Q8WWY6 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
MBD3L1Q8WWY6 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
MBD3L1Q8WWY6 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC18.28■□□□□ 0.52
MBD3L1Q8WWY6 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
MBD3L1Q8WWY6 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
MBD3L1Q8WWY6 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
MBD3L1Q8WWY6 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
MBD3L1Q8WWY6 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
MBD3L1Q8WWY6 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
MBD3L1Q8WWY6 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC18.28■□□□□ 0.52
MBD3L1Q8WWY6 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
MBD3L1Q8WWY6 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
MBD3L1Q8WWY6 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC18.27■□□□□ 0.52
MBD3L1Q8WWY6 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC18.27■□□□□ 0.52
MBD3L1Q8WWY6 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
MBD3L1Q8WWY6 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
MBD3L1Q8WWY6 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
MBD3L1Q8WWY6 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
MBD3L1Q8WWY6 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
MBD3L1Q8WWY6 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
MBD3L1Q8WWY6 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
MBD3L1Q8WWY6 AL024507.2-201ENST00000606070 2574 ntBASIC18.26■□□□□ 0.51
MBD3L1Q8WWY6 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
MBD3L1Q8WWY6 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
MBD3L1Q8WWY6 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
MBD3L1Q8WWY6 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
MBD3L1Q8WWY6 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
MBD3L1Q8WWY6 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
MBD3L1Q8WWY6 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
MBD3L1Q8WWY6 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
MBD3L1Q8WWY6 SUZ12P1-203ENST00000578195 985 ntBASIC18.25■□□□□ 0.51
MBD3L1Q8WWY6 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
MBD3L1Q8WWY6 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
MBD3L1Q8WWY6 HLA-L-211ENST00000482052 1765 ntBASIC18.25■□□□□ 0.51
MBD3L1Q8WWY6 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
MBD3L1Q8WWY6 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
MBD3L1Q8WWY6 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
MBD3L1Q8WWY6 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
MBD3L1Q8WWY6 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
MBD3L1Q8WWY6 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
MBD3L1Q8WWY6 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
MBD3L1Q8WWY6 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC18.24■□□□□ 0.51
MBD3L1Q8WWY6 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
MBD3L1Q8WWY6 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC18.24■□□□□ 0.51
MBD3L1Q8WWY6 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
MBD3L1Q8WWY6 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
MBD3L1Q8WWY6 EFS-203ENST00000429593 2610 ntTSL 2 BASIC18.23■□□□□ 0.51
MBD3L1Q8WWY6 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
MBD3L1Q8WWY6 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC18.23■□□□□ 0.51
MBD3L1Q8WWY6 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
MBD3L1Q8WWY6 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
MBD3L1Q8WWY6 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
MBD3L1Q8WWY6 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
MBD3L1Q8WWY6 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
MBD3L1Q8WWY6 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
MBD3L1Q8WWY6 DUX4L28-201ENST00000623687 678 ntBASIC18.23■□□□□ 0.51
MBD3L1Q8WWY6 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC18.23■□□□□ 0.51
MBD3L1Q8WWY6 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
MBD3L1Q8WWY6 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
MBD3L1Q8WWY6 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
MBD3L1Q8WWY6 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC18.23■□□□□ 0.51
MBD3L1Q8WWY6 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
MBD3L1Q8WWY6 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
MBD3L1Q8WWY6 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
MBD3L1Q8WWY6 ECEL1P1-201ENST00000373592 1742 ntBASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms