Protein–RNA interactions for Protein: Q8WWF5

ZNRF4, E3 ubiquitin-protein ligase ZNRF4, humanhuman

Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNRF4Q8WWF5 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ZNRF4Q8WWF5 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ZNRF4Q8WWF5 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ZNRF4Q8WWF5 AC133552.2-201ENST00000619106 1032 ntBASIC20.81■□□□□ 0.92
ZNRF4Q8WWF5 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ZNRF4Q8WWF5 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ZNRF4Q8WWF5 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
ZNRF4Q8WWF5 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
ZNRF4Q8WWF5 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
ZNRF4Q8WWF5 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
ZNRF4Q8WWF5 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
ZNRF4Q8WWF5 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
ZNRF4Q8WWF5 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
ZNRF4Q8WWF5 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.8■□□□□ 0.92
ZNRF4Q8WWF5 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
ZNRF4Q8WWF5 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
ZNRF4Q8WWF5 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ZNRF4Q8WWF5 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ZNRF4Q8WWF5 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
ZNRF4Q8WWF5 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
ZNRF4Q8WWF5 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ZNRF4Q8WWF5 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC20.78■□□□□ 0.92
ZNRF4Q8WWF5 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.78■□□□□ 0.92
ZNRF4Q8WWF5 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.78■□□□□ 0.92
ZNRF4Q8WWF5 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZNRF4Q8WWF5 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZNRF4Q8WWF5 ABHD17AP3-201ENST00000503096 1137 ntBASIC20.78■□□□□ 0.92
ZNRF4Q8WWF5 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC20.78■□□□□ 0.92
ZNRF4Q8WWF5 AC133561.1-201ENST00000568600 2415 ntBASIC20.78■□□□□ 0.92
ZNRF4Q8WWF5 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZNRF4Q8WWF5 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZNRF4Q8WWF5 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC20.78■□□□□ 0.92
ZNRF4Q8WWF5 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ZNRF4Q8WWF5 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ZNRF4Q8WWF5 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ZNRF4Q8WWF5 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC20.77■□□□□ 0.92
ZNRF4Q8WWF5 HES4-204ENST00000484667 667 ntTSL 3 BASIC20.77■□□□□ 0.92
ZNRF4Q8WWF5 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
ZNRF4Q8WWF5 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ZNRF4Q8WWF5 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.77■□□□□ 0.91
ZNRF4Q8WWF5 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
ZNRF4Q8WWF5 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ZNRF4Q8WWF5 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ZNRF4Q8WWF5 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ZNRF4Q8WWF5 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
ZNRF4Q8WWF5 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
ZNRF4Q8WWF5 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.76■□□□□ 0.91
ZNRF4Q8WWF5 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
ZNRF4Q8WWF5 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
ZNRF4Q8WWF5 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
ZNRF4Q8WWF5 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
ZNRF4Q8WWF5 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ZNRF4Q8WWF5 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.76■□□□□ 0.91
ZNRF4Q8WWF5 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.76■□□□□ 0.91
ZNRF4Q8WWF5 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.75■□□□□ 0.91
ZNRF4Q8WWF5 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ZNRF4Q8WWF5 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ZNRF4Q8WWF5 SPCS2P3-201ENST00000500401 656 ntBASIC20.75■□□□□ 0.91
ZNRF4Q8WWF5 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ZNRF4Q8WWF5 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ZNRF4Q8WWF5 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC20.75■□□□□ 0.91
ZNRF4Q8WWF5 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ZNRF4Q8WWF5 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ZNRF4Q8WWF5 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
ZNRF4Q8WWF5 RNF126P1-201ENST00000567452 1320 ntBASIC20.75■□□□□ 0.91
ZNRF4Q8WWF5 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ZNRF4Q8WWF5 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ZNRF4Q8WWF5 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ZNRF4Q8WWF5 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ZNRF4Q8WWF5 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ZNRF4Q8WWF5 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ZNRF4Q8WWF5 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ZNRF4Q8WWF5 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
ZNRF4Q8WWF5 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC20.74■□□□□ 0.91
ZNRF4Q8WWF5 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
ZNRF4Q8WWF5 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ZNRF4Q8WWF5 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.74■□□□□ 0.91
ZNRF4Q8WWF5 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
ZNRF4Q8WWF5 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.74■□□□□ 0.91
ZNRF4Q8WWF5 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.74■□□□□ 0.91
ZNRF4Q8WWF5 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
ZNRF4Q8WWF5 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ZNRF4Q8WWF5 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
ZNRF4Q8WWF5 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.73■□□□□ 0.91
ZNRF4Q8WWF5 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.73■□□□□ 0.91
ZNRF4Q8WWF5 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ZNRF4Q8WWF5 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC20.73■□□□□ 0.91
ZNRF4Q8WWF5 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ZNRF4Q8WWF5 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC20.73■□□□□ 0.91
ZNRF4Q8WWF5 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ZNRF4Q8WWF5 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.72■□□□□ 0.91
ZNRF4Q8WWF5 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ZNRF4Q8WWF5 AL592293.1-201ENST00000502889 1188 ntBASIC20.72■□□□□ 0.91
ZNRF4Q8WWF5 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
ZNRF4Q8WWF5 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
ZNRF4Q8WWF5 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ZNRF4Q8WWF5 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ZNRF4Q8WWF5 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.72■□□□□ 0.91
ZNRF4Q8WWF5 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
ZNRF4Q8WWF5 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms