Protein–RNA interactions for Protein: Q8TBE1

CNIH3, Protein cornichon homolog 3, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3Q8TBE1 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CNIH3Q8TBE1 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC21.29■■□□□ 1
CNIH3Q8TBE1 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC21.29■■□□□ 1
CNIH3Q8TBE1 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
CNIH3Q8TBE1 AC008813.1-201ENST00000536597 885 ntBASIC21.29■■□□□ 1
CNIH3Q8TBE1 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CNIH3Q8TBE1 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.28■■□□□ 1
CNIH3Q8TBE1 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CNIH3Q8TBE1 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
CNIH3Q8TBE1 CHST11-202ENST00000546689 756 ntTSL 2 BASIC21.28■■□□□ 1
CNIH3Q8TBE1 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.28■■□□□ 1
CNIH3Q8TBE1 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CNIH3Q8TBE1 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC21.28■■□□□ 1
CNIH3Q8TBE1 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC21.28■■□□□ 1
CNIH3Q8TBE1 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21.28■■□□□ 1
CNIH3Q8TBE1 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
CNIH3Q8TBE1 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21.27■■□□□ 1
CNIH3Q8TBE1 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
CNIH3Q8TBE1 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
CNIH3Q8TBE1 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
CNIH3Q8TBE1 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
CNIH3Q8TBE1 AC233723.2-201ENST00000623798 2106 ntBASIC21.27■■□□□ 1
CNIH3Q8TBE1 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
CNIH3Q8TBE1 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC21.27■□□□□ 0.99
CNIH3Q8TBE1 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CNIH3Q8TBE1 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CNIH3Q8TBE1 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
CNIH3Q8TBE1 LINC00565-201ENST00000562710 2331 ntBASIC21.26■□□□□ 0.99
CNIH3Q8TBE1 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CNIH3Q8TBE1 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC21.26■□□□□ 0.99
CNIH3Q8TBE1 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC21.26■□□□□ 0.99
CNIH3Q8TBE1 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CNIH3Q8TBE1 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.26■□□□□ 0.99
CNIH3Q8TBE1 HLA-L-211ENST00000482052 1765 ntBASIC21.25■□□□□ 0.99
CNIH3Q8TBE1 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
CNIH3Q8TBE1 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CNIH3Q8TBE1 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
CNIH3Q8TBE1 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CNIH3Q8TBE1 CHST11-203ENST00000547956 936 ntTSL 2 BASIC21.25■□□□□ 0.99
CNIH3Q8TBE1 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CNIH3Q8TBE1 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC21.25■□□□□ 0.99
CNIH3Q8TBE1 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CNIH3Q8TBE1 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21.24■□□□□ 0.99
CNIH3Q8TBE1 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CNIH3Q8TBE1 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CNIH3Q8TBE1 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CNIH3Q8TBE1 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
CNIH3Q8TBE1 MED25-210ENST00000612854 801 ntTSL 5 BASIC21.24■□□□□ 0.99
CNIH3Q8TBE1 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CNIH3Q8TBE1 MED25-214ENST00000622402 642 ntTSL 5 BASIC21.24■□□□□ 0.99
CNIH3Q8TBE1 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CNIH3Q8TBE1 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
CNIH3Q8TBE1 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC21.24■□□□□ 0.99
CNIH3Q8TBE1 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.24■□□□□ 0.99
CNIH3Q8TBE1 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CNIH3Q8TBE1 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CNIH3Q8TBE1 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CNIH3Q8TBE1 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CNIH3Q8TBE1 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CNIH3Q8TBE1 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
CNIH3Q8TBE1 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CNIH3Q8TBE1 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CNIH3Q8TBE1 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC21.23■□□□□ 0.99
CNIH3Q8TBE1 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CNIH3Q8TBE1 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CNIH3Q8TBE1 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CNIH3Q8TBE1 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CNIH3Q8TBE1 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
CNIH3Q8TBE1 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CNIH3Q8TBE1 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CNIH3Q8TBE1 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CNIH3Q8TBE1 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CNIH3Q8TBE1 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CNIH3Q8TBE1 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CNIH3Q8TBE1 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CNIH3Q8TBE1 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21.21■□□□□ 0.99
CNIH3Q8TBE1 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC21.2■□□□□ 0.99
CNIH3Q8TBE1 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CNIH3Q8TBE1 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CNIH3Q8TBE1 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CNIH3Q8TBE1 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CNIH3Q8TBE1 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CNIH3Q8TBE1 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CNIH3Q8TBE1 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC21.2■□□□□ 0.98
CNIH3Q8TBE1 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CNIH3Q8TBE1 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
CNIH3Q8TBE1 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CNIH3Q8TBE1 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.2■□□□□ 0.98
CNIH3Q8TBE1 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.2■□□□□ 0.98
CNIH3Q8TBE1 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CNIH3Q8TBE1 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
CNIH3Q8TBE1 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.19■□□□□ 0.98
CNIH3Q8TBE1 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CNIH3Q8TBE1 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CNIH3Q8TBE1 HLA-V-202ENST00000446817 847 ntBASIC21.19■□□□□ 0.98
CNIH3Q8TBE1 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CNIH3Q8TBE1 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CNIH3Q8TBE1 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC21.19■□□□□ 0.98
CNIH3Q8TBE1 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC21.19■□□□□ 0.98
CNIH3Q8TBE1 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 12.1 ms