Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC27.84■■■□□ 2.05
NKX2-3Q8TAU0 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
NKX2-3Q8TAU0 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
NKX2-3Q8TAU0 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
NKX2-3Q8TAU0 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
NKX2-3Q8TAU0 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
NKX2-3Q8TAU0 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC27.84■■■□□ 2.05
NKX2-3Q8TAU0 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
NKX2-3Q8TAU0 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
NKX2-3Q8TAU0 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
NKX2-3Q8TAU0 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC27.83■■■□□ 2.05
NKX2-3Q8TAU0 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC27.83■■■□□ 2.05
NKX2-3Q8TAU0 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC27.83■■■□□ 2.05
NKX2-3Q8TAU0 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC27.83■■■□□ 2.05
NKX2-3Q8TAU0 MIR4787-201ENST00000607364 84 ntBASIC27.83■■■□□ 2.05
NKX2-3Q8TAU0 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
NKX2-3Q8TAU0 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
NKX2-3Q8TAU0 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
NKX2-3Q8TAU0 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
NKX2-3Q8TAU0 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC27.82■■■□□ 2.04
NKX2-3Q8TAU0 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC27.82■■■□□ 2.04
NKX2-3Q8TAU0 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC27.82■■■□□ 2.04
NKX2-3Q8TAU0 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
NKX2-3Q8TAU0 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
NKX2-3Q8TAU0 AC022211.4-201ENST00000625094 2161 ntBASIC27.82■■■□□ 2.04
NKX2-3Q8TAU0 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
NKX2-3Q8TAU0 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
NKX2-3Q8TAU0 BX664725.1-201ENST00000438252 379 ntBASIC27.81■■■□□ 2.04
NKX2-3Q8TAU0 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
NKX2-3Q8TAU0 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
NKX2-3Q8TAU0 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
NKX2-3Q8TAU0 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC27.81■■■□□ 2.04
NKX2-3Q8TAU0 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
NKX2-3Q8TAU0 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC27.8■■■□□ 2.04
NKX2-3Q8TAU0 KRT16P3-201ENST00000439127 1283 ntBASIC27.8■■■□□ 2.04
NKX2-3Q8TAU0 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC27.8■■■□□ 2.04
NKX2-3Q8TAU0 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC27.8■■■□□ 2.04
NKX2-3Q8TAU0 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC27.8■■■□□ 2.04
NKX2-3Q8TAU0 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC27.8■■■□□ 2.04
NKX2-3Q8TAU0 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC27.79■■■□□ 2.04
NKX2-3Q8TAU0 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
NKX2-3Q8TAU0 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC27.79■■■□□ 2.04
NKX2-3Q8TAU0 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC27.79■■■□□ 2.04
NKX2-3Q8TAU0 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
NKX2-3Q8TAU0 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
NKX2-3Q8TAU0 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC27.79■■■□□ 2.04
NKX2-3Q8TAU0 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
NKX2-3Q8TAU0 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC27.79■■■□□ 2.04
NKX2-3Q8TAU0 NALT1-201ENST00000429224 738 ntTSL 5 BASIC27.79■■■□□ 2.04
NKX2-3Q8TAU0 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
NKX2-3Q8TAU0 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC27.79■■■□□ 2.04
NKX2-3Q8TAU0 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
NKX2-3Q8TAU0 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC27.78■■■□□ 2.04
NKX2-3Q8TAU0 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC27.78■■■□□ 2.04
NKX2-3Q8TAU0 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
NKX2-3Q8TAU0 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC27.78■■■□□ 2.04
NKX2-3Q8TAU0 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC27.78■■■□□ 2.04
NKX2-3Q8TAU0 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC27.77■■■□□ 2.04
NKX2-3Q8TAU0 AC120024.1-201ENST00000562672 995 ntBASIC27.77■■■□□ 2.04
NKX2-3Q8TAU0 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC27.77■■■□□ 2.04
NKX2-3Q8TAU0 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC27.77■■■□□ 2.04
NKX2-3Q8TAU0 MED17-227ENST00000640521 2047 ntTSL 5 BASIC27.77■■■□□ 2.04
NKX2-3Q8TAU0 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
NKX2-3Q8TAU0 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
NKX2-3Q8TAU0 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
NKX2-3Q8TAU0 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
NKX2-3Q8TAU0 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
NKX2-3Q8TAU0 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC27.76■■■□□ 2.03
NKX2-3Q8TAU0 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC27.76■■■□□ 2.03
NKX2-3Q8TAU0 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
NKX2-3Q8TAU0 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC27.75■■■□□ 2.03
NKX2-3Q8TAU0 AC138932.3-201ENST00000567634 1902 ntBASIC27.75■■■□□ 2.03
NKX2-3Q8TAU0 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
NKX2-3Q8TAU0 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC27.75■■■□□ 2.03
NKX2-3Q8TAU0 UNC93B8-201ENST00000511903 705 ntBASIC27.75■■■□□ 2.03
NKX2-3Q8TAU0 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC27.75■■■□□ 2.03
NKX2-3Q8TAU0 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC27.75■■■□□ 2.03
NKX2-3Q8TAU0 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC27.75■■■□□ 2.03
NKX2-3Q8TAU0 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC27.75■■■□□ 2.03
NKX2-3Q8TAU0 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
NKX2-3Q8TAU0 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC27.74■■■□□ 2.03
NKX2-3Q8TAU0 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
NKX2-3Q8TAU0 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC27.74■■■□□ 2.03
NKX2-3Q8TAU0 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC27.74■■■□□ 2.03
NKX2-3Q8TAU0 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC27.73■■■□□ 2.03
NKX2-3Q8TAU0 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC27.73■■■□□ 2.03
NKX2-3Q8TAU0 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC27.73■■■□□ 2.03
NKX2-3Q8TAU0 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC27.73■■■□□ 2.03
NKX2-3Q8TAU0 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC27.73■■■□□ 2.03
NKX2-3Q8TAU0 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
NKX2-3Q8TAU0 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
NKX2-3Q8TAU0 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC27.72■■■□□ 2.03
NKX2-3Q8TAU0 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC27.72■■■□□ 2.03
NKX2-3Q8TAU0 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC27.72■■■□□ 2.03
NKX2-3Q8TAU0 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC27.71■■■□□ 2.03
NKX2-3Q8TAU0 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC27.71■■■□□ 2.03
NKX2-3Q8TAU0 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC27.71■■■□□ 2.03
NKX2-3Q8TAU0 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
NKX2-3Q8TAU0 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC27.71■■■□□ 2.03
NKX2-3Q8TAU0 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC27.71■■■□□ 2.03
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms