Protein–RNA interactions for Protein: Q8NG66

NEK11, Serine/threonine-protein kinase Nek11, humanhuman

Predictions only

Length 645 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK11Q8NG66 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
NEK11Q8NG66 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
NEK11Q8NG66 KRT18P10-201ENST00000388836 1287 ntBASIC25.48■■□□□ 1.67
NEK11Q8NG66 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
NEK11Q8NG66 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
NEK11Q8NG66 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
NEK11Q8NG66 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC25.48■■□□□ 1.67
NEK11Q8NG66 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.67
NEK11Q8NG66 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
NEK11Q8NG66 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC25.47■■□□□ 1.67
NEK11Q8NG66 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC25.47■■□□□ 1.67
NEK11Q8NG66 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC25.47■■□□□ 1.67
NEK11Q8NG66 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
NEK11Q8NG66 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC25.47■■□□□ 1.67
NEK11Q8NG66 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
NEK11Q8NG66 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
NEK11Q8NG66 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
NEK11Q8NG66 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
NEK11Q8NG66 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
NEK11Q8NG66 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
NEK11Q8NG66 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC25.45■■□□□ 1.67
NEK11Q8NG66 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC25.45■■□□□ 1.66
NEK11Q8NG66 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
NEK11Q8NG66 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC25.45■■□□□ 1.66
NEK11Q8NG66 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
NEK11Q8NG66 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
NEK11Q8NG66 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
NEK11Q8NG66 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
NEK11Q8NG66 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC25.44■■□□□ 1.66
NEK11Q8NG66 HES4-204ENST00000484667 667 ntTSL 3 BASIC25.44■■□□□ 1.66
NEK11Q8NG66 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC25.44■■□□□ 1.66
NEK11Q8NG66 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
NEK11Q8NG66 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
NEK11Q8NG66 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC25.43■■□□□ 1.66
NEK11Q8NG66 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
NEK11Q8NG66 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
NEK11Q8NG66 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC25.42■■□□□ 1.66
NEK11Q8NG66 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC25.42■■□□□ 1.66
NEK11Q8NG66 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
NEK11Q8NG66 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
NEK11Q8NG66 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
NEK11Q8NG66 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC25.42■■□□□ 1.66
NEK11Q8NG66 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC25.42■■□□□ 1.66
NEK11Q8NG66 FOXO3B-201ENST00000395675 1928 ntBASIC25.42■■□□□ 1.66
NEK11Q8NG66 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
NEK11Q8NG66 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC25.42■■□□□ 1.66
NEK11Q8NG66 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
NEK11Q8NG66 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC25.42■■□□□ 1.66
NEK11Q8NG66 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
NEK11Q8NG66 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC25.42■■□□□ 1.66
NEK11Q8NG66 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
NEK11Q8NG66 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
NEK11Q8NG66 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC25.41■■□□□ 1.66
NEK11Q8NG66 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
NEK11Q8NG66 CASK-201ENST00000378154 2494 ntTSL 5 BASIC25.41■■□□□ 1.66
NEK11Q8NG66 AC009831.1-201ENST00000580420 1582 ntBASIC25.41■■□□□ 1.66
NEK11Q8NG66 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC25.41■■□□□ 1.66
NEK11Q8NG66 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC25.41■■□□□ 1.66
NEK11Q8NG66 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC25.41■■□□□ 1.66
NEK11Q8NG66 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
NEK11Q8NG66 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC25.4■■□□□ 1.66
NEK11Q8NG66 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
NEK11Q8NG66 AC133552.2-201ENST00000619106 1032 ntBASIC25.4■■□□□ 1.66
NEK11Q8NG66 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC25.4■■□□□ 1.66
NEK11Q8NG66 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
NEK11Q8NG66 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC25.39■■□□□ 1.66
NEK11Q8NG66 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.66
NEK11Q8NG66 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
NEK11Q8NG66 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
NEK11Q8NG66 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.65
NEK11Q8NG66 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
NEK11Q8NG66 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC25.39■■□□□ 1.65
NEK11Q8NG66 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
NEK11Q8NG66 AC079834.2-201ENST00000609776 1949 ntBASIC25.38■■□□□ 1.65
NEK11Q8NG66 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC25.38■■□□□ 1.65
NEK11Q8NG66 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC25.38■■□□□ 1.65
NEK11Q8NG66 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
NEK11Q8NG66 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC25.37■■□□□ 1.65
NEK11Q8NG66 ABHD17AP3-201ENST00000503096 1137 ntBASIC25.37■■□□□ 1.65
NEK11Q8NG66 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC25.37■■□□□ 1.65
NEK11Q8NG66 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC25.37■■□□□ 1.65
NEK11Q8NG66 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
NEK11Q8NG66 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
NEK11Q8NG66 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
NEK11Q8NG66 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC25.36■■□□□ 1.65
NEK11Q8NG66 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
NEK11Q8NG66 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
NEK11Q8NG66 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
NEK11Q8NG66 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
NEK11Q8NG66 RNF126P1-201ENST00000567452 1320 ntBASIC25.36■■□□□ 1.65
NEK11Q8NG66 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
NEK11Q8NG66 AC068473.5-201ENST00000616428 2072 ntBASIC25.35■■□□□ 1.65
NEK11Q8NG66 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC25.35■■□□□ 1.65
NEK11Q8NG66 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC25.35■■□□□ 1.65
NEK11Q8NG66 HLA-L-211ENST00000482052 1765 ntBASIC25.35■■□□□ 1.65
NEK11Q8NG66 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC25.35■■□□□ 1.65
NEK11Q8NG66 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
NEK11Q8NG66 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
NEK11Q8NG66 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
NEK11Q8NG66 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC25.34■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms