Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
SPTSSBQ8NFR3 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC12.91□□□□□ -0.34
SPTSSBQ8NFR3 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
SPTSSBQ8NFR3 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC12.91□□□□□ -0.34
SPTSSBQ8NFR3 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SPTSSBQ8NFR3 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC12.91□□□□□ -0.34
SPTSSBQ8NFR3 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
SPTSSBQ8NFR3 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
SPTSSBQ8NFR3 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SPTSSBQ8NFR3 ABCB10P4-201ENST00000566803 2184 ntBASIC12.9□□□□□ -0.34
SPTSSBQ8NFR3 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
SPTSSBQ8NFR3 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SPTSSBQ8NFR3 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SPTSSBQ8NFR3 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
SPTSSBQ8NFR3 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SPTSSBQ8NFR3 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
SPTSSBQ8NFR3 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SPTSSBQ8NFR3 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC12.9□□□□□ -0.34
SPTSSBQ8NFR3 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
SPTSSBQ8NFR3 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.35
SPTSSBQ8NFR3 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
SPTSSBQ8NFR3 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
SPTSSBQ8NFR3 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.35
SPTSSBQ8NFR3 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC12.89□□□□□ -0.35
SPTSSBQ8NFR3 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SPTSSBQ8NFR3 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SPTSSBQ8NFR3 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
SPTSSBQ8NFR3 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SPTSSBQ8NFR3 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SPTSSBQ8NFR3 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
SPTSSBQ8NFR3 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SPTSSBQ8NFR3 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SPTSSBQ8NFR3 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SPTSSBQ8NFR3 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SPTSSBQ8NFR3 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC12.89□□□□□ -0.35
SPTSSBQ8NFR3 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SPTSSBQ8NFR3 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC12.88□□□□□ -0.35
SPTSSBQ8NFR3 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SPTSSBQ8NFR3 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SPTSSBQ8NFR3 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
SPTSSBQ8NFR3 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC12.88□□□□□ -0.35
SPTSSBQ8NFR3 AC145676.1-201ENST00000514988 2004 ntBASIC12.88□□□□□ -0.35
SPTSSBQ8NFR3 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
SPTSSBQ8NFR3 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
SPTSSBQ8NFR3 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC12.88□□□□□ -0.35
SPTSSBQ8NFR3 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC12.88□□□□□ -0.35
SPTSSBQ8NFR3 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
SPTSSBQ8NFR3 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
SPTSSBQ8NFR3 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SPTSSBQ8NFR3 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
SPTSSBQ8NFR3 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SPTSSBQ8NFR3 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SPTSSBQ8NFR3 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SPTSSBQ8NFR3 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SPTSSBQ8NFR3 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
SPTSSBQ8NFR3 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SPTSSBQ8NFR3 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC12.88□□□□□ -0.35
SPTSSBQ8NFR3 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
SPTSSBQ8NFR3 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SPTSSBQ8NFR3 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SPTSSBQ8NFR3 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
SPTSSBQ8NFR3 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC12.87□□□□□ -0.35
SPTSSBQ8NFR3 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC12.87□□□□□ -0.35
SPTSSBQ8NFR3 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
SPTSSBQ8NFR3 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC12.87□□□□□ -0.35
SPTSSBQ8NFR3 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC12.87□□□□□ -0.35
SPTSSBQ8NFR3 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC12.87□□□□□ -0.35
SPTSSBQ8NFR3 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SPTSSBQ8NFR3 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC12.87□□□□□ -0.35
SPTSSBQ8NFR3 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SPTSSBQ8NFR3 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
SPTSSBQ8NFR3 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SPTSSBQ8NFR3 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SPTSSBQ8NFR3 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC12.87□□□□□ -0.35
SPTSSBQ8NFR3 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SPTSSBQ8NFR3 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SPTSSBQ8NFR3 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SPTSSBQ8NFR3 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
SPTSSBQ8NFR3 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SPTSSBQ8NFR3 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC12.86□□□□□ -0.35
SPTSSBQ8NFR3 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SPTSSBQ8NFR3 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SPTSSBQ8NFR3 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC12.86□□□□□ -0.35
SPTSSBQ8NFR3 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SPTSSBQ8NFR3 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC12.86□□□□□ -0.35
SPTSSBQ8NFR3 AC091060.1-201ENST00000623524 1766 ntBASIC12.86□□□□□ -0.35
SPTSSBQ8NFR3 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SPTSSBQ8NFR3 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SPTSSBQ8NFR3 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SPTSSBQ8NFR3 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SPTSSBQ8NFR3 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SPTSSBQ8NFR3 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SPTSSBQ8NFR3 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
SPTSSBQ8NFR3 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
SPTSSBQ8NFR3 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SPTSSBQ8NFR3 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SPTSSBQ8NFR3 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
SPTSSBQ8NFR3 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SPTSSBQ8NFR3 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SPTSSBQ8NFR3 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms