Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PCDH20Q8N6Y1 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PCDH20Q8N6Y1 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC23.82■■□□□ 1.4
PCDH20Q8N6Y1 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PCDH20Q8N6Y1 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
PCDH20Q8N6Y1 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PCDH20Q8N6Y1 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC23.81■■□□□ 1.4
PCDH20Q8N6Y1 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PCDH20Q8N6Y1 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PCDH20Q8N6Y1 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
PCDH20Q8N6Y1 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
PCDH20Q8N6Y1 OR2A1-AS1-204ENST00000470435 602 ntBASIC23.81■■□□□ 1.4
PCDH20Q8N6Y1 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC23.81■■□□□ 1.4
PCDH20Q8N6Y1 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC23.81■■□□□ 1.4
PCDH20Q8N6Y1 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
PCDH20Q8N6Y1 AC090877.2-201ENST00000558441 1738 ntBASIC23.81■■□□□ 1.4
PCDH20Q8N6Y1 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
PCDH20Q8N6Y1 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
PCDH20Q8N6Y1 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
PCDH20Q8N6Y1 AC239859.2-201ENST00000444165 318 ntBASIC23.8■■□□□ 1.4
PCDH20Q8N6Y1 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC23.8■■□□□ 1.4
PCDH20Q8N6Y1 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC23.8■■□□□ 1.4
PCDH20Q8N6Y1 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
PCDH20Q8N6Y1 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PCDH20Q8N6Y1 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
PCDH20Q8N6Y1 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PCDH20Q8N6Y1 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
PCDH20Q8N6Y1 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
PCDH20Q8N6Y1 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC23.79■■□□□ 1.4
PCDH20Q8N6Y1 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC23.78■■□□□ 1.4
PCDH20Q8N6Y1 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PCDH20Q8N6Y1 CEBPA-AS1-201ENST00000592982 2198 ntBASIC23.78■■□□□ 1.4
PCDH20Q8N6Y1 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
PCDH20Q8N6Y1 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
PCDH20Q8N6Y1 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PCDH20Q8N6Y1 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
PCDH20Q8N6Y1 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
PCDH20Q8N6Y1 KRT125P-201ENST00000546827 989 ntBASIC23.78■■□□□ 1.4
PCDH20Q8N6Y1 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC23.78■■□□□ 1.4
PCDH20Q8N6Y1 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PCDH20Q8N6Y1 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC23.77■■□□□ 1.4
PCDH20Q8N6Y1 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
PCDH20Q8N6Y1 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
PCDH20Q8N6Y1 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC23.77■■□□□ 1.4
PCDH20Q8N6Y1 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
PCDH20Q8N6Y1 SLC6A10P-202ENST00000431994 2058 ntBASIC23.77■■□□□ 1.4
PCDH20Q8N6Y1 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PCDH20Q8N6Y1 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC23.76■■□□□ 1.39
PCDH20Q8N6Y1 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PCDH20Q8N6Y1 GUSBP5-201ENST00000418136 578 ntBASIC23.76■■□□□ 1.39
PCDH20Q8N6Y1 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC23.76■■□□□ 1.39
PCDH20Q8N6Y1 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC23.76■■□□□ 1.39
PCDH20Q8N6Y1 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC23.76■■□□□ 1.39
PCDH20Q8N6Y1 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
PCDH20Q8N6Y1 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PCDH20Q8N6Y1 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PCDH20Q8N6Y1 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC23.75■■□□□ 1.39
PCDH20Q8N6Y1 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
PCDH20Q8N6Y1 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
PCDH20Q8N6Y1 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC23.74■■□□□ 1.39
PCDH20Q8N6Y1 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
PCDH20Q8N6Y1 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
PCDH20Q8N6Y1 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
PCDH20Q8N6Y1 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PCDH20Q8N6Y1 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC23.73■■□□□ 1.39
PCDH20Q8N6Y1 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC23.73■■□□□ 1.39
PCDH20Q8N6Y1 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PCDH20Q8N6Y1 MIR4787-201ENST00000607364 84 ntBASIC23.73■■□□□ 1.39
PCDH20Q8N6Y1 AC021242.3-201ENST00000607598 1377 ntBASIC23.73■■□□□ 1.39
PCDH20Q8N6Y1 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PCDH20Q8N6Y1 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC23.73■■□□□ 1.39
PCDH20Q8N6Y1 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
PCDH20Q8N6Y1 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC23.72■■□□□ 1.39
PCDH20Q8N6Y1 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC23.72■■□□□ 1.39
PCDH20Q8N6Y1 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PCDH20Q8N6Y1 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC23.72■■□□□ 1.39
PCDH20Q8N6Y1 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC23.72■■□□□ 1.39
PCDH20Q8N6Y1 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC23.71■■□□□ 1.39
PCDH20Q8N6Y1 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
PCDH20Q8N6Y1 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC23.71■■□□□ 1.39
PCDH20Q8N6Y1 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
PCDH20Q8N6Y1 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC23.71■■□□□ 1.39
PCDH20Q8N6Y1 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC23.71■■□□□ 1.39
PCDH20Q8N6Y1 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
PCDH20Q8N6Y1 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
PCDH20Q8N6Y1 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC23.7■■□□□ 1.38
PCDH20Q8N6Y1 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC23.7■■□□□ 1.38
PCDH20Q8N6Y1 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC23.7■■□□□ 1.38
PCDH20Q8N6Y1 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
PCDH20Q8N6Y1 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PCDH20Q8N6Y1 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PCDH20Q8N6Y1 AC093323.1-202ENST00000635031 2045 ntBASIC23.69■■□□□ 1.38
PCDH20Q8N6Y1 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
PCDH20Q8N6Y1 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC23.69■■□□□ 1.38
PCDH20Q8N6Y1 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC23.69■■□□□ 1.38
PCDH20Q8N6Y1 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC23.69■■□□□ 1.38
PCDH20Q8N6Y1 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PCDH20Q8N6Y1 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PCDH20Q8N6Y1 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
PCDH20Q8N6Y1 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 12.9 ms