Protein–RNA interactions for Protein: Q8N584

TTC39C, Tetratricopeptide repeat protein 39C, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39CQ8N584 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC24.91■■□□□ 1.58
TTC39CQ8N584 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
TTC39CQ8N584 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC24.91■■□□□ 1.58
TTC39CQ8N584 AC138932.3-201ENST00000567634 1902 ntBASIC24.9■■□□□ 1.58
TTC39CQ8N584 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
TTC39CQ8N584 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
TTC39CQ8N584 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
TTC39CQ8N584 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC24.9■■□□□ 1.58
TTC39CQ8N584 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
TTC39CQ8N584 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
TTC39CQ8N584 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
TTC39CQ8N584 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC24.89■■□□□ 1.58
TTC39CQ8N584 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
TTC39CQ8N584 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
TTC39CQ8N584 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC24.88■■□□□ 1.57
TTC39CQ8N584 MIR4281-201ENST00000580852 62 ntBASIC24.88■■□□□ 1.57
TTC39CQ8N584 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
TTC39CQ8N584 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
TTC39CQ8N584 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
TTC39CQ8N584 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC24.88■■□□□ 1.57
TTC39CQ8N584 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
TTC39CQ8N584 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC24.87■■□□□ 1.57
TTC39CQ8N584 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC24.87■■□□□ 1.57
TTC39CQ8N584 EED-207ENST00000528180 1745 ntTSL 5 BASIC24.86■■□□□ 1.57
TTC39CQ8N584 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
TTC39CQ8N584 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
TTC39CQ8N584 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
TTC39CQ8N584 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
TTC39CQ8N584 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
TTC39CQ8N584 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC24.85■■□□□ 1.57
TTC39CQ8N584 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC24.85■■□□□ 1.57
TTC39CQ8N584 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
TTC39CQ8N584 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC24.85■■□□□ 1.57
TTC39CQ8N584 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC24.85■■□□□ 1.57
TTC39CQ8N584 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC24.85■■□□□ 1.57
TTC39CQ8N584 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC24.85■■□□□ 1.57
TTC39CQ8N584 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC24.84■■□□□ 1.57
TTC39CQ8N584 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
TTC39CQ8N584 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC24.83■■□□□ 1.57
TTC39CQ8N584 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
TTC39CQ8N584 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
TTC39CQ8N584 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC24.83■■□□□ 1.57
TTC39CQ8N584 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC24.83■■□□□ 1.57
TTC39CQ8N584 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.56
TTC39CQ8N584 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC24.82■■□□□ 1.56
TTC39CQ8N584 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
TTC39CQ8N584 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
TTC39CQ8N584 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC24.82■■□□□ 1.56
TTC39CQ8N584 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
TTC39CQ8N584 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC24.82■■□□□ 1.56
TTC39CQ8N584 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
TTC39CQ8N584 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC24.81■■□□□ 1.56
TTC39CQ8N584 AC137630.3-201ENST00000607245 391 ntBASIC24.81■■□□□ 1.56
TTC39CQ8N584 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC24.81■■□□□ 1.56
TTC39CQ8N584 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
TTC39CQ8N584 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC24.81■■□□□ 1.56
TTC39CQ8N584 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
TTC39CQ8N584 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
TTC39CQ8N584 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
TTC39CQ8N584 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
TTC39CQ8N584 PRTG-204ENST00000561292 833 ntTSL 3 BASIC24.8■■□□□ 1.56
TTC39CQ8N584 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
TTC39CQ8N584 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC24.8■■□□□ 1.56
TTC39CQ8N584 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
TTC39CQ8N584 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC24.8■■□□□ 1.56
TTC39CQ8N584 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
TTC39CQ8N584 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
TTC39CQ8N584 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
TTC39CQ8N584 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC24.79■■□□□ 1.56
TTC39CQ8N584 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
TTC39CQ8N584 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC24.79■■□□□ 1.56
TTC39CQ8N584 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC24.79■■□□□ 1.56
TTC39CQ8N584 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
TTC39CQ8N584 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC24.79■■□□□ 1.56
TTC39CQ8N584 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC24.78■■□□□ 1.56
TTC39CQ8N584 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC24.78■■□□□ 1.56
TTC39CQ8N584 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
TTC39CQ8N584 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC24.78■■□□□ 1.56
TTC39CQ8N584 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
TTC39CQ8N584 AL161729.1-201ENST00000604104 1402 ntBASIC24.78■■□□□ 1.56
TTC39CQ8N584 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
TTC39CQ8N584 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC24.77■■□□□ 1.56
TTC39CQ8N584 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC24.77■■□□□ 1.56
TTC39CQ8N584 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
TTC39CQ8N584 Z92544.1-202ENST00000571933 1220 ntBASIC24.77■■□□□ 1.56
TTC39CQ8N584 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
TTC39CQ8N584 HLA-L-211ENST00000482052 1765 ntBASIC24.77■■□□□ 1.56
TTC39CQ8N584 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
TTC39CQ8N584 BX664725.1-201ENST00000438252 379 ntBASIC24.76■■□□□ 1.55
TTC39CQ8N584 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC24.76■■□□□ 1.55
TTC39CQ8N584 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC24.76■■□□□ 1.55
TTC39CQ8N584 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC24.76■■□□□ 1.55
TTC39CQ8N584 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
TTC39CQ8N584 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC24.76■■□□□ 1.55
TTC39CQ8N584 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC24.76■■□□□ 1.55
TTC39CQ8N584 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
TTC39CQ8N584 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC24.76■■□□□ 1.55
TTC39CQ8N584 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
TTC39CQ8N584 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC24.75■■□□□ 1.55
TTC39CQ8N584 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms