Protein–RNA interactions for Protein: Q8N4Z0

RAB42, Putative Ras-related protein Rab-42, humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB42Q8N4Z0 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
RAB42Q8N4Z0 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC22.71■■□□□ 1.23
RAB42Q8N4Z0 AC103724.3-201ENST00000564481 992 ntBASIC22.71■■□□□ 1.23
RAB42Q8N4Z0 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC22.71■■□□□ 1.23
RAB42Q8N4Z0 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
RAB42Q8N4Z0 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
RAB42Q8N4Z0 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC22.71■■□□□ 1.23
RAB42Q8N4Z0 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC22.71■■□□□ 1.23
RAB42Q8N4Z0 AP003733.4-201ENST00000623785 1697 ntBASIC22.71■■□□□ 1.23
RAB42Q8N4Z0 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
RAB42Q8N4Z0 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
RAB42Q8N4Z0 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC22.7■■□□□ 1.22
RAB42Q8N4Z0 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC22.7■■□□□ 1.22
RAB42Q8N4Z0 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
RAB42Q8N4Z0 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC22.69■■□□□ 1.22
RAB42Q8N4Z0 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC22.69■■□□□ 1.22
RAB42Q8N4Z0 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC22.69■■□□□ 1.22
RAB42Q8N4Z0 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
RAB42Q8N4Z0 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
RAB42Q8N4Z0 GAK-223ENST00000628912 497 ntTSL 5 BASIC22.69■■□□□ 1.22
RAB42Q8N4Z0 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
RAB42Q8N4Z0 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
RAB42Q8N4Z0 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
RAB42Q8N4Z0 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
RAB42Q8N4Z0 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
RAB42Q8N4Z0 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC22.68■■□□□ 1.22
RAB42Q8N4Z0 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
RAB42Q8N4Z0 TK2-216ENST00000564917 1156 ntTSL 3 BASIC22.67■■□□□ 1.22
RAB42Q8N4Z0 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RAB42Q8N4Z0 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RAB42Q8N4Z0 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RAB42Q8N4Z0 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
RAB42Q8N4Z0 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
RAB42Q8N4Z0 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
RAB42Q8N4Z0 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
RAB42Q8N4Z0 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC22.66■■□□□ 1.22
RAB42Q8N4Z0 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
RAB42Q8N4Z0 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC22.66■■□□□ 1.22
RAB42Q8N4Z0 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC22.66■■□□□ 1.22
RAB42Q8N4Z0 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC22.66■■□□□ 1.22
RAB42Q8N4Z0 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
RAB42Q8N4Z0 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RAB42Q8N4Z0 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC22.65■■□□□ 1.22
RAB42Q8N4Z0 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
RAB42Q8N4Z0 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC22.65■■□□□ 1.22
RAB42Q8N4Z0 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RAB42Q8N4Z0 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
RAB42Q8N4Z0 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RAB42Q8N4Z0 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RAB42Q8N4Z0 LSR-205ENST00000427250 1606 ntTSL 2 BASIC22.64■■□□□ 1.22
RAB42Q8N4Z0 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC22.64■■□□□ 1.22
RAB42Q8N4Z0 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.22
RAB42Q8N4Z0 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.21
RAB42Q8N4Z0 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC22.64■■□□□ 1.21
RAB42Q8N4Z0 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
RAB42Q8N4Z0 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC22.64■■□□□ 1.21
RAB42Q8N4Z0 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
RAB42Q8N4Z0 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
RAB42Q8N4Z0 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
RAB42Q8N4Z0 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RAB42Q8N4Z0 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
RAB42Q8N4Z0 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC22.63■■□□□ 1.21
RAB42Q8N4Z0 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RAB42Q8N4Z0 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RAB42Q8N4Z0 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
RAB42Q8N4Z0 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RAB42Q8N4Z0 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
RAB42Q8N4Z0 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC22.63■■□□□ 1.21
RAB42Q8N4Z0 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
RAB42Q8N4Z0 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
RAB42Q8N4Z0 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
RAB42Q8N4Z0 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC22.62■■□□□ 1.21
RAB42Q8N4Z0 MIR4281-201ENST00000580852 62 ntBASIC22.62■■□□□ 1.21
RAB42Q8N4Z0 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC22.62■■□□□ 1.21
RAB42Q8N4Z0 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
RAB42Q8N4Z0 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC22.61■■□□□ 1.21
RAB42Q8N4Z0 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC22.61■■□□□ 1.21
RAB42Q8N4Z0 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
RAB42Q8N4Z0 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
RAB42Q8N4Z0 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
RAB42Q8N4Z0 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
RAB42Q8N4Z0 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
RAB42Q8N4Z0 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
RAB42Q8N4Z0 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
RAB42Q8N4Z0 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
RAB42Q8N4Z0 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
RAB42Q8N4Z0 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
RAB42Q8N4Z0 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
RAB42Q8N4Z0 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC22.6■■□□□ 1.21
RAB42Q8N4Z0 MED17-227ENST00000640521 2047 ntTSL 5 BASIC22.59■■□□□ 1.21
RAB42Q8N4Z0 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC22.59■■□□□ 1.21
RAB42Q8N4Z0 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
RAB42Q8N4Z0 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
RAB42Q8N4Z0 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
RAB42Q8N4Z0 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
RAB42Q8N4Z0 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC22.58■■□□□ 1.21
RAB42Q8N4Z0 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
RAB42Q8N4Z0 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC22.58■■□□□ 1.21
RAB42Q8N4Z0 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
RAB42Q8N4Z0 AC138932.3-201ENST00000567634 1902 ntBASIC22.58■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms