Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CHPFQ8IZ52 AC090877.2-201ENST00000558441 1738 ntBASIC23.82■■□□□ 1.4
CHPFQ8IZ52 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CHPFQ8IZ52 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CHPFQ8IZ52 MIR3621-201ENST00000580529 85 ntBASIC23.82■■□□□ 1.4
CHPFQ8IZ52 AL356740.2-201ENST00000601559 647 ntBASIC23.82■■□□□ 1.4
CHPFQ8IZ52 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC23.82■■□□□ 1.4
CHPFQ8IZ52 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CHPFQ8IZ52 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
CHPFQ8IZ52 AL136116.3-201ENST00000402907 1138 ntBASIC23.81■■□□□ 1.4
CHPFQ8IZ52 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CHPFQ8IZ52 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC23.81■■□□□ 1.4
CHPFQ8IZ52 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
CHPFQ8IZ52 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CHPFQ8IZ52 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
CHPFQ8IZ52 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC23.81■■□□□ 1.4
CHPFQ8IZ52 AC135731.1-201ENST00000569415 2548 ntBASIC23.8■■□□□ 1.4
CHPFQ8IZ52 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
CHPFQ8IZ52 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CHPFQ8IZ52 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CHPFQ8IZ52 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC23.8■■□□□ 1.4
CHPFQ8IZ52 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC23.8■■□□□ 1.4
CHPFQ8IZ52 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC23.8■■□□□ 1.4
CHPFQ8IZ52 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC23.8■■□□□ 1.4
CHPFQ8IZ52 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CHPFQ8IZ52 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CHPFQ8IZ52 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC23.8■■□□□ 1.4
CHPFQ8IZ52 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CHPFQ8IZ52 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC23.79■■□□□ 1.4
CHPFQ8IZ52 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC23.79■■□□□ 1.4
CHPFQ8IZ52 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC23.79■■□□□ 1.4
CHPFQ8IZ52 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC23.79■■□□□ 1.4
CHPFQ8IZ52 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC23.79■■□□□ 1.4
CHPFQ8IZ52 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CHPFQ8IZ52 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
CHPFQ8IZ52 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CHPFQ8IZ52 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CHPFQ8IZ52 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC23.78■■□□□ 1.4
CHPFQ8IZ52 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CHPFQ8IZ52 AC010501.1-201ENST00000606270 1962 ntBASIC23.78■■□□□ 1.4
CHPFQ8IZ52 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CHPFQ8IZ52 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CHPFQ8IZ52 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC23.78■■□□□ 1.4
CHPFQ8IZ52 AK3-203ENST00000447596 705 ntTSL 2 BASIC23.78■■□□□ 1.4
CHPFQ8IZ52 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC23.78■■□□□ 1.4
CHPFQ8IZ52 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC23.78■■□□□ 1.4
CHPFQ8IZ52 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
CHPFQ8IZ52 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CHPFQ8IZ52 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CHPFQ8IZ52 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC23.78■■□□□ 1.4
CHPFQ8IZ52 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC23.77■■□□□ 1.4
CHPFQ8IZ52 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
CHPFQ8IZ52 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC23.76■■□□□ 1.39
CHPFQ8IZ52 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CHPFQ8IZ52 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC23.76■■□□□ 1.39
CHPFQ8IZ52 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CHPFQ8IZ52 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CHPFQ8IZ52 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC23.76■■□□□ 1.39
CHPFQ8IZ52 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC23.76■■□□□ 1.39
CHPFQ8IZ52 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CHPFQ8IZ52 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CHPFQ8IZ52 CD72-202ENST00000378430 585 ntTSL 3 BASIC23.76■■□□□ 1.39
CHPFQ8IZ52 NALT1-201ENST00000429224 738 ntTSL 5 BASIC23.76■■□□□ 1.39
CHPFQ8IZ52 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC23.76■■□□□ 1.39
CHPFQ8IZ52 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CHPFQ8IZ52 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC23.76■■□□□ 1.39
CHPFQ8IZ52 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
CHPFQ8IZ52 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC23.76■■□□□ 1.39
CHPFQ8IZ52 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
CHPFQ8IZ52 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CHPFQ8IZ52 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
CHPFQ8IZ52 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC23.75■■□□□ 1.39
CHPFQ8IZ52 RALB-208ENST00000631312 311 ntTSL 5 BASIC23.75■■□□□ 1.39
CHPFQ8IZ52 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CHPFQ8IZ52 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CHPFQ8IZ52 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CHPFQ8IZ52 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC23.74■■□□□ 1.39
CHPFQ8IZ52 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC23.74■■□□□ 1.39
CHPFQ8IZ52 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CHPFQ8IZ52 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CHPFQ8IZ52 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CHPFQ8IZ52 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
CHPFQ8IZ52 AL139246.5-201ENST00000606645 996 ntBASIC23.73■■□□□ 1.39
CHPFQ8IZ52 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
CHPFQ8IZ52 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
CHPFQ8IZ52 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CHPFQ8IZ52 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC23.73■■□□□ 1.39
CHPFQ8IZ52 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CHPFQ8IZ52 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
CHPFQ8IZ52 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC23.72■■□□□ 1.39
CHPFQ8IZ52 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CHPFQ8IZ52 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CHPFQ8IZ52 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CHPFQ8IZ52 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
CHPFQ8IZ52 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CHPFQ8IZ52 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CHPFQ8IZ52 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CHPFQ8IZ52 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CHPFQ8IZ52 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CHPFQ8IZ52 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms