Protein–RNA interactions for Protein: Q8IY21

DDX60, Probable ATP-dependent RNA helicase DDX60, humanhuman

Known RBP Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX60Q8IY21 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
DDX60Q8IY21 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC29.28■■■□□ 2.28
DDX60Q8IY21 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC29.28■■■□□ 2.28
DDX60Q8IY21 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC29.27■■■□□ 2.28
DDX60Q8IY21 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC29.27■■■□□ 2.28
DDX60Q8IY21 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC29.27■■■□□ 2.28
DDX60Q8IY21 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
DDX60Q8IY21 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
DDX60Q8IY21 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
DDX60Q8IY21 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
DDX60Q8IY21 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC29.27■■■□□ 2.28
DDX60Q8IY21 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC29.27■■■□□ 2.28
DDX60Q8IY21 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
DDX60Q8IY21 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.28
DDX60Q8IY21 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
DDX60Q8IY21 AC092803.2-201ENST00000564287 1899 ntBASIC29.26■■■□□ 2.27
DDX60Q8IY21 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC29.25■■■□□ 2.27
DDX60Q8IY21 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC29.25■■■□□ 2.27
DDX60Q8IY21 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
DDX60Q8IY21 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
DDX60Q8IY21 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC29.25■■■□□ 2.27
DDX60Q8IY21 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC29.25■■■□□ 2.27
DDX60Q8IY21 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
DDX60Q8IY21 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
DDX60Q8IY21 AK3-203ENST00000447596 705 ntTSL 2 BASIC29.25■■■□□ 2.27
DDX60Q8IY21 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
DDX60Q8IY21 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
DDX60Q8IY21 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC29.24■■■□□ 2.27
DDX60Q8IY21 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
DDX60Q8IY21 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC29.23■■■□□ 2.27
DDX60Q8IY21 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC29.23■■■□□ 2.27
DDX60Q8IY21 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC29.23■■■□□ 2.27
DDX60Q8IY21 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC29.23■■■□□ 2.27
DDX60Q8IY21 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC29.23■■■□□ 2.27
DDX60Q8IY21 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
DDX60Q8IY21 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC29.22■■■□□ 2.27
DDX60Q8IY21 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
DDX60Q8IY21 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC29.22■■■□□ 2.27
DDX60Q8IY21 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC29.22■■■□□ 2.27
DDX60Q8IY21 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC29.22■■■□□ 2.27
DDX60Q8IY21 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC29.22■■■□□ 2.27
DDX60Q8IY21 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
DDX60Q8IY21 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC29.22■■■□□ 2.27
DDX60Q8IY21 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
DDX60Q8IY21 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
DDX60Q8IY21 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
DDX60Q8IY21 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
DDX60Q8IY21 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC29.21■■■□□ 2.27
DDX60Q8IY21 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.27
DDX60Q8IY21 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC29.2■■■□□ 2.27
DDX60Q8IY21 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC29.2■■■□□ 2.27
DDX60Q8IY21 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC29.2■■■□□ 2.26
DDX60Q8IY21 AL139246.5-201ENST00000606645 996 ntBASIC29.2■■■□□ 2.26
DDX60Q8IY21 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC29.2■■■□□ 2.26
DDX60Q8IY21 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
DDX60Q8IY21 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
DDX60Q8IY21 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC29.19■■■□□ 2.26
DDX60Q8IY21 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC29.19■■■□□ 2.26
DDX60Q8IY21 AL356740.2-201ENST00000601559 647 ntBASIC29.19■■■□□ 2.26
DDX60Q8IY21 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
DDX60Q8IY21 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
DDX60Q8IY21 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
DDX60Q8IY21 LBH-205ENST00000407930 756 ntTSL 2 BASIC29.18■■■□□ 2.26
DDX60Q8IY21 NALT1-201ENST00000429224 738 ntTSL 5 BASIC29.18■■■□□ 2.26
DDX60Q8IY21 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
DDX60Q8IY21 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC29.17■■■□□ 2.26
DDX60Q8IY21 MIR935-201ENST00000401179 91 ntBASIC29.17■■■□□ 2.26
DDX60Q8IY21 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
DDX60Q8IY21 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC29.17■■■□□ 2.26
DDX60Q8IY21 RALB-208ENST00000631312 311 ntTSL 5 BASIC29.17■■■□□ 2.26
DDX60Q8IY21 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC29.17■■■□□ 2.26
DDX60Q8IY21 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC29.17■■■□□ 2.26
DDX60Q8IY21 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC29.17■■■□□ 2.26
DDX60Q8IY21 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
DDX60Q8IY21 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
DDX60Q8IY21 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC29.16■■■□□ 2.26
DDX60Q8IY21 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
DDX60Q8IY21 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC29.16■■■□□ 2.26
DDX60Q8IY21 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC29.16■■■□□ 2.26
DDX60Q8IY21 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
DDX60Q8IY21 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC29.15■■■□□ 2.26
DDX60Q8IY21 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC29.15■■■□□ 2.26
DDX60Q8IY21 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC29.15■■■□□ 2.26
DDX60Q8IY21 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
DDX60Q8IY21 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC29.14■■■□□ 2.26
DDX60Q8IY21 AC096631.2-201ENST00000436136 790 ntBASIC29.14■■■□□ 2.26
DDX60Q8IY21 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.25
DDX60Q8IY21 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC29.14■■■□□ 2.25
DDX60Q8IY21 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
DDX60Q8IY21 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
DDX60Q8IY21 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
DDX60Q8IY21 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC29.13■■■□□ 2.25
DDX60Q8IY21 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC29.13■■■□□ 2.25
DDX60Q8IY21 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
DDX60Q8IY21 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC29.12■■■□□ 2.25
DDX60Q8IY21 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
DDX60Q8IY21 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
DDX60Q8IY21 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
DDX60Q8IY21 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
DDX60Q8IY21 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC29.11■■■□□ 2.25
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms