Protein–RNA interactions for Protein: Q86T96

RNF180, E3 ubiquitin-protein ligase RNF180, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF180Q86T96 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
RNF180Q86T96 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
RNF180Q86T96 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC26.18■■□□□ 1.78
RNF180Q86T96 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC26.18■■□□□ 1.78
RNF180Q86T96 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC26.18■■□□□ 1.78
RNF180Q86T96 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC26.17■■□□□ 1.78
RNF180Q86T96 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC26.17■■□□□ 1.78
RNF180Q86T96 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC26.17■■□□□ 1.78
RNF180Q86T96 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC26.17■■□□□ 1.78
RNF180Q86T96 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC26.17■■□□□ 1.78
RNF180Q86T96 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
RNF180Q86T96 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC26.17■■□□□ 1.78
RNF180Q86T96 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC26.16■■□□□ 1.78
RNF180Q86T96 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC26.16■■□□□ 1.78
RNF180Q86T96 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
RNF180Q86T96 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC26.16■■□□□ 1.78
RNF180Q86T96 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
RNF180Q86T96 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC26.16■■□□□ 1.78
RNF180Q86T96 AC104564.3-201ENST00000582367 638 ntBASIC26.16■■□□□ 1.78
RNF180Q86T96 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
RNF180Q86T96 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC26.16■■□□□ 1.78
RNF180Q86T96 GATM-206ENST00000558336 1522 ntTSL 2 BASIC26.15■■□□□ 1.78
RNF180Q86T96 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
RNF180Q86T96 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
RNF180Q86T96 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
RNF180Q86T96 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC26.15■■□□□ 1.78
RNF180Q86T96 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC26.15■■□□□ 1.78
RNF180Q86T96 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
RNF180Q86T96 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
RNF180Q86T96 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC26.15■■□□□ 1.78
RNF180Q86T96 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
RNF180Q86T96 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.78
RNF180Q86T96 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC26.14■■□□□ 1.78
RNF180Q86T96 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC26.14■■□□□ 1.78
RNF180Q86T96 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC26.14■■□□□ 1.78
RNF180Q86T96 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
RNF180Q86T96 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
RNF180Q86T96 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC26.14■■□□□ 1.77
RNF180Q86T96 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC26.14■■□□□ 1.77
RNF180Q86T96 AC105265.2-201ENST00000467189 838 ntBASIC26.13■■□□□ 1.77
RNF180Q86T96 DUX4L19-201ENST00000557448 1267 ntBASIC26.13■■□□□ 1.77
RNF180Q86T96 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
RNF180Q86T96 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
RNF180Q86T96 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
RNF180Q86T96 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC26.12■■□□□ 1.77
RNF180Q86T96 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
RNF180Q86T96 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
RNF180Q86T96 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
RNF180Q86T96 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
RNF180Q86T96 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
RNF180Q86T96 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
RNF180Q86T96 GRAMD4P4-201ENST00000613563 1115 ntBASIC26.11■■□□□ 1.77
RNF180Q86T96 AL136967.2-201ENST00000623968 743 ntBASIC26.11■■□□□ 1.77
RNF180Q86T96 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC26.11■■□□□ 1.77
RNF180Q86T96 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC26.11■■□□□ 1.77
RNF180Q86T96 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
RNF180Q86T96 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC26.1■■□□□ 1.77
RNF180Q86T96 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
RNF180Q86T96 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
RNF180Q86T96 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
RNF180Q86T96 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC26.1■■□□□ 1.77
RNF180Q86T96 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
RNF180Q86T96 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
RNF180Q86T96 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC26.09■■□□□ 1.77
RNF180Q86T96 AF213884.3-201ENST00000563833 479 ntBASIC26.09■■□□□ 1.77
RNF180Q86T96 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC26.09■■□□□ 1.77
RNF180Q86T96 AC142086.6-201ENST00000621154 1765 ntBASIC26.09■■□□□ 1.77
RNF180Q86T96 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC26.09■■□□□ 1.77
RNF180Q86T96 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
RNF180Q86T96 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC26.08■■□□□ 1.77
RNF180Q86T96 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC26.08■■□□□ 1.77
RNF180Q86T96 AC004448.1-201ENST00000458332 883 ntBASIC26.08■■□□□ 1.77
RNF180Q86T96 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC26.08■■□□□ 1.77
RNF180Q86T96 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC26.08■■□□□ 1.77
RNF180Q86T96 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC26.08■■□□□ 1.76
RNF180Q86T96 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
RNF180Q86T96 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
RNF180Q86T96 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
RNF180Q86T96 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC26.07■■□□□ 1.76
RNF180Q86T96 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC26.07■■□□□ 1.76
RNF180Q86T96 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC26.07■■□□□ 1.76
RNF180Q86T96 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
RNF180Q86T96 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC26.07■■□□□ 1.76
RNF180Q86T96 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC26.07■■□□□ 1.76
RNF180Q86T96 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
RNF180Q86T96 SF1-220ENST00000626028 704 ntTSL 2 BASIC26.07■■□□□ 1.76
RNF180Q86T96 MIR939-201ENST00000401314 82 ntBASIC26.06■■□□□ 1.76
RNF180Q86T96 AC005703.6-201ENST00000623265 1329 ntBASIC26.06■■□□□ 1.76
RNF180Q86T96 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
RNF180Q86T96 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC26.06■■□□□ 1.76
RNF180Q86T96 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
RNF180Q86T96 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC26.05■■□□□ 1.76
RNF180Q86T96 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC26.05■■□□□ 1.76
RNF180Q86T96 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
RNF180Q86T96 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC26.05■■□□□ 1.76
RNF180Q86T96 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC26.05■■□□□ 1.76
RNF180Q86T96 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC26.05■■□□□ 1.76
RNF180Q86T96 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
RNF180Q86T96 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
RNF180Q86T96 AC097639.1-201ENST00000565519 1891 ntBASIC26.04■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms