Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CSMD2Q7Z408 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CSMD2Q7Z408 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CSMD2Q7Z408 IRS3P-201ENST00000223076 1006 ntBASIC20.03■□□□□ 0.8
CSMD2Q7Z408 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CSMD2Q7Z408 AC027682.1-201ENST00000562846 899 ntBASIC20.03■□□□□ 0.8
CSMD2Q7Z408 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CSMD2Q7Z408 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CSMD2Q7Z408 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC20.03■□□□□ 0.8
CSMD2Q7Z408 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
CSMD2Q7Z408 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.03■□□□□ 0.8
CSMD2Q7Z408 AL031602.1-201ENST00000633169 911 ntBASIC20.03■□□□□ 0.8
CSMD2Q7Z408 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC20.03■□□□□ 0.8
CSMD2Q7Z408 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC20.03■□□□□ 0.8
CSMD2Q7Z408 DLX3-202ENST00000512495 834 ntTSL 2 BASIC20.02■□□□□ 0.8
CSMD2Q7Z408 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CSMD2Q7Z408 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
CSMD2Q7Z408 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CSMD2Q7Z408 SYT6-210ENST00000641643 1587 ntBASIC20.02■□□□□ 0.8
CSMD2Q7Z408 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CSMD2Q7Z408 AL137784.2-201ENST00000607332 1000 ntBASIC20.02■□□□□ 0.8
CSMD2Q7Z408 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CSMD2Q7Z408 JTB-203ENST00000368589 1216 ntTSL 2 BASIC20.01■□□□□ 0.79
CSMD2Q7Z408 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CSMD2Q7Z408 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CSMD2Q7Z408 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC20.01■□□□□ 0.79
CSMD2Q7Z408 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CSMD2Q7Z408 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC20.01■□□□□ 0.79
CSMD2Q7Z408 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC20.01■□□□□ 0.79
CSMD2Q7Z408 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
CSMD2Q7Z408 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CSMD2Q7Z408 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CSMD2Q7Z408 LINC01003-201ENST00000564834 1764 ntBASIC20■□□□□ 0.79
CSMD2Q7Z408 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC20■□□□□ 0.79
CSMD2Q7Z408 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CSMD2Q7Z408 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CSMD2Q7Z408 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20■□□□□ 0.79
CSMD2Q7Z408 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CSMD2Q7Z408 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC19.99■□□□□ 0.79
CSMD2Q7Z408 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CSMD2Q7Z408 KRT18P5-201ENST00000436075 1291 ntBASIC19.99■□□□□ 0.79
CSMD2Q7Z408 AC034268.1-201ENST00000441047 882 ntBASIC19.99■□□□□ 0.79
CSMD2Q7Z408 CA15P2-201ENST00000611168 834 ntBASIC19.99■□□□□ 0.79
CSMD2Q7Z408 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CSMD2Q7Z408 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CSMD2Q7Z408 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC19.99■□□□□ 0.79
CSMD2Q7Z408 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CSMD2Q7Z408 GATM-206ENST00000558336 1522 ntTSL 2 BASIC19.98■□□□□ 0.79
CSMD2Q7Z408 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
CSMD2Q7Z408 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CSMD2Q7Z408 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CSMD2Q7Z408 ABHD17AP1-201ENST00000358206 933 ntBASIC19.98■□□□□ 0.79
CSMD2Q7Z408 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.97■□□□□ 0.79
CSMD2Q7Z408 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.97■□□□□ 0.79
CSMD2Q7Z408 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC19.97■□□□□ 0.79
CSMD2Q7Z408 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CSMD2Q7Z408 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
CSMD2Q7Z408 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CSMD2Q7Z408 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CSMD2Q7Z408 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.96■□□□□ 0.79
CSMD2Q7Z408 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CSMD2Q7Z408 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CSMD2Q7Z408 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC19.96■□□□□ 0.79
CSMD2Q7Z408 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC19.95■□□□□ 0.78
CSMD2Q7Z408 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
CSMD2Q7Z408 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.95■□□□□ 0.78
CSMD2Q7Z408 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CSMD2Q7Z408 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CSMD2Q7Z408 PROC-203ENST00000409048 1586 ntTSL 5 BASIC19.95■□□□□ 0.78
CSMD2Q7Z408 YBX1P1-201ENST00000445822 960 ntBASIC19.95■□□□□ 0.78
CSMD2Q7Z408 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CSMD2Q7Z408 DRD5P2-201ENST00000421395 2012 ntBASIC19.94■□□□□ 0.78
CSMD2Q7Z408 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CSMD2Q7Z408 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CSMD2Q7Z408 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.93■□□□□ 0.78
CSMD2Q7Z408 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CSMD2Q7Z408 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.93■□□□□ 0.78
CSMD2Q7Z408 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC19.93■□□□□ 0.78
CSMD2Q7Z408 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC19.93■□□□□ 0.78
CSMD2Q7Z408 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CSMD2Q7Z408 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
CSMD2Q7Z408 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC19.92■□□□□ 0.78
CSMD2Q7Z408 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CSMD2Q7Z408 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CSMD2Q7Z408 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC19.92■□□□□ 0.78
CSMD2Q7Z408 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
CSMD2Q7Z408 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CSMD2Q7Z408 PTMA-205ENST00000410064 814 ntTSL 2 BASIC19.92■□□□□ 0.78
CSMD2Q7Z408 FOXO3B-201ENST00000395675 1928 ntBASIC19.92■□□□□ 0.78
CSMD2Q7Z408 AC004911.1-201ENST00000416316 871 ntBASIC19.92■□□□□ 0.78
CSMD2Q7Z408 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
CSMD2Q7Z408 RAP2CP1-201ENST00000605103 478 ntBASIC19.92■□□□□ 0.78
CSMD2Q7Z408 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CSMD2Q7Z408 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
CSMD2Q7Z408 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CSMD2Q7Z408 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC19.91■□□□□ 0.78
CSMD2Q7Z408 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CSMD2Q7Z408 DUX4L2-201ENST00000561772 1275 ntBASIC19.91■□□□□ 0.78
CSMD2Q7Z408 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC19.91■□□□□ 0.78
CSMD2Q7Z408 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms