Protein–RNA interactions for Protein: Q6IN85

PPP4R3A, Serine/threonine-protein phosphatase 4 regulatory subunit 3A, humanhuman

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3AQ6IN85 AC138932.3-201ENST00000567634 1902 ntBASIC26.57■■□□□ 1.84
PPP4R3AQ6IN85 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
PPP4R3AQ6IN85 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
PPP4R3AQ6IN85 THA1P-201ENST00000590384 1145 ntBASIC26.56■■□□□ 1.84
PPP4R3AQ6IN85 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC26.56■■□□□ 1.84
PPP4R3AQ6IN85 AP003733.4-201ENST00000623785 1697 ntBASIC26.56■■□□□ 1.84
PPP4R3AQ6IN85 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
PPP4R3AQ6IN85 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC26.55■■□□□ 1.84
PPP4R3AQ6IN85 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC26.55■■□□□ 1.84
PPP4R3AQ6IN85 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC26.55■■□□□ 1.84
PPP4R3AQ6IN85 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
PPP4R3AQ6IN85 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
PPP4R3AQ6IN85 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
PPP4R3AQ6IN85 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC26.54■■□□□ 1.84
PPP4R3AQ6IN85 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC26.53■■□□□ 1.84
PPP4R3AQ6IN85 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC26.53■■□□□ 1.84
PPP4R3AQ6IN85 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
PPP4R3AQ6IN85 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
PPP4R3AQ6IN85 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC26.53■■□□□ 1.84
PPP4R3AQ6IN85 AL031848.2-201ENST00000607670 837 ntBASIC26.53■■□□□ 1.84
PPP4R3AQ6IN85 GAK-223ENST00000628912 497 ntTSL 5 BASIC26.53■■□□□ 1.84
PPP4R3AQ6IN85 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
PPP4R3AQ6IN85 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC26.52■■□□□ 1.84
PPP4R3AQ6IN85 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
PPP4R3AQ6IN85 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC26.51■■□□□ 1.84
PPP4R3AQ6IN85 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
PPP4R3AQ6IN85 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
PPP4R3AQ6IN85 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
PPP4R3AQ6IN85 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
PPP4R3AQ6IN85 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC26.5■■□□□ 1.83
PPP4R3AQ6IN85 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
PPP4R3AQ6IN85 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
PPP4R3AQ6IN85 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
PPP4R3AQ6IN85 TK2-216ENST00000564917 1156 ntTSL 3 BASIC26.5■■□□□ 1.83
PPP4R3AQ6IN85 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
PPP4R3AQ6IN85 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC26.5■■□□□ 1.83
PPP4R3AQ6IN85 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
PPP4R3AQ6IN85 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC26.5■■□□□ 1.83
PPP4R3AQ6IN85 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
PPP4R3AQ6IN85 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
PPP4R3AQ6IN85 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
PPP4R3AQ6IN85 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC26.49■■□□□ 1.83
PPP4R3AQ6IN85 MIR4281-201ENST00000580852 62 ntBASIC26.49■■□□□ 1.83
PPP4R3AQ6IN85 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC26.48■■□□□ 1.83
PPP4R3AQ6IN85 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
PPP4R3AQ6IN85 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
PPP4R3AQ6IN85 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
PPP4R3AQ6IN85 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
PPP4R3AQ6IN85 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
PPP4R3AQ6IN85 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
PPP4R3AQ6IN85 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC26.47■■□□□ 1.83
PPP4R3AQ6IN85 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC26.47■■□□□ 1.83
PPP4R3AQ6IN85 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC26.47■■□□□ 1.83
PPP4R3AQ6IN85 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
PPP4R3AQ6IN85 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC26.47■■□□□ 1.83
PPP4R3AQ6IN85 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
PPP4R3AQ6IN85 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC26.46■■□□□ 1.83
PPP4R3AQ6IN85 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC26.46■■□□□ 1.83
PPP4R3AQ6IN85 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC26.46■■□□□ 1.83
PPP4R3AQ6IN85 PRTG-204ENST00000561292 833 ntTSL 3 BASIC26.46■■□□□ 1.83
PPP4R3AQ6IN85 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC26.46■■□□□ 1.83
PPP4R3AQ6IN85 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
PPP4R3AQ6IN85 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
PPP4R3AQ6IN85 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC26.45■■□□□ 1.83
PPP4R3AQ6IN85 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC26.45■■□□□ 1.82
PPP4R3AQ6IN85 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
PPP4R3AQ6IN85 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC26.45■■□□□ 1.82
PPP4R3AQ6IN85 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC26.45■■□□□ 1.82
PPP4R3AQ6IN85 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC26.45■■□□□ 1.82
PPP4R3AQ6IN85 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
PPP4R3AQ6IN85 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC26.44■■□□□ 1.82
PPP4R3AQ6IN85 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
PPP4R3AQ6IN85 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC26.43■■□□□ 1.82
PPP4R3AQ6IN85 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
PPP4R3AQ6IN85 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC26.43■■□□□ 1.82
PPP4R3AQ6IN85 AL451085.2-201ENST00000605085 799 ntBASIC26.43■■□□□ 1.82
PPP4R3AQ6IN85 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC26.43■■□□□ 1.82
PPP4R3AQ6IN85 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
PPP4R3AQ6IN85 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC26.43■■□□□ 1.82
PPP4R3AQ6IN85 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
PPP4R3AQ6IN85 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
PPP4R3AQ6IN85 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
PPP4R3AQ6IN85 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
PPP4R3AQ6IN85 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC26.42■■□□□ 1.82
PPP4R3AQ6IN85 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
PPP4R3AQ6IN85 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC26.42■■□□□ 1.82
PPP4R3AQ6IN85 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
PPP4R3AQ6IN85 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
PPP4R3AQ6IN85 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC26.42■■□□□ 1.82
PPP4R3AQ6IN85 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC26.42■■□□□ 1.82
PPP4R3AQ6IN85 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC26.41■■□□□ 1.82
PPP4R3AQ6IN85 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
PPP4R3AQ6IN85 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC26.41■■□□□ 1.82
PPP4R3AQ6IN85 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
PPP4R3AQ6IN85 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
PPP4R3AQ6IN85 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC26.41■■□□□ 1.82
PPP4R3AQ6IN85 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
PPP4R3AQ6IN85 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
PPP4R3AQ6IN85 EED-207ENST00000528180 1745 ntTSL 5 BASIC26.4■■□□□ 1.82
PPP4R3AQ6IN85 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms