Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC38.94■■■■□ 3.82
SNAPC4Q5SXM2 IKBKGP1-201ENST00000612193 1073 ntBASIC38.94■■■■□ 3.82
SNAPC4Q5SXM2 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC38.94■■■■□ 3.82
SNAPC4Q5SXM2 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC38.93■■■■□ 3.82
SNAPC4Q5SXM2 DUX4L19-201ENST00000557448 1267 ntBASIC38.93■■■■□ 3.82
SNAPC4Q5SXM2 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC38.93■■■■□ 3.82
SNAPC4Q5SXM2 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC38.93■■■■□ 3.82
SNAPC4Q5SXM2 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC38.93■■■■□ 3.82
SNAPC4Q5SXM2 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC38.92■■■■□ 3.82
SNAPC4Q5SXM2 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC38.92■■■■□ 3.82
SNAPC4Q5SXM2 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC38.92■■■■□ 3.82
SNAPC4Q5SXM2 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC38.92■■■■□ 3.82
SNAPC4Q5SXM2 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC38.92■■■■□ 3.82
SNAPC4Q5SXM2 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC38.92■■■■□ 3.82
SNAPC4Q5SXM2 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC38.91■■■■□ 3.82
SNAPC4Q5SXM2 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC38.91■■■■□ 3.82
SNAPC4Q5SXM2 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC38.91■■■■□ 3.82
SNAPC4Q5SXM2 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC38.91■■■■□ 3.82
SNAPC4Q5SXM2 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC38.9■■■■□ 3.82
SNAPC4Q5SXM2 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC38.9■■■■□ 3.82
SNAPC4Q5SXM2 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC38.9■■■■□ 3.82
SNAPC4Q5SXM2 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC38.9■■■■□ 3.82
SNAPC4Q5SXM2 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC38.89■■■■□ 3.82
SNAPC4Q5SXM2 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC38.89■■■■□ 3.82
SNAPC4Q5SXM2 AC004448.1-201ENST00000458332 883 ntBASIC38.89■■■■□ 3.82
SNAPC4Q5SXM2 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC38.89■■■■□ 3.82
SNAPC4Q5SXM2 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC38.89■■■■□ 3.82
SNAPC4Q5SXM2 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC38.88■■■■□ 3.81
SNAPC4Q5SXM2 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC38.88■■■■□ 3.81
SNAPC4Q5SXM2 FOXO3B-201ENST00000395675 1928 ntBASIC38.88■■■■□ 3.81
SNAPC4Q5SXM2 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC38.88■■■■□ 3.81
SNAPC4Q5SXM2 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC38.88■■■■□ 3.81
SNAPC4Q5SXM2 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC38.87■■■■□ 3.81
SNAPC4Q5SXM2 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC38.86■■■■□ 3.81
SNAPC4Q5SXM2 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC38.86■■■■□ 3.81
SNAPC4Q5SXM2 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC38.86■■■■□ 3.81
SNAPC4Q5SXM2 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC38.86■■■■□ 3.81
SNAPC4Q5SXM2 JTB-203ENST00000368589 1216 ntTSL 2 BASIC38.86■■■■□ 3.81
SNAPC4Q5SXM2 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC38.86■■■■□ 3.81
SNAPC4Q5SXM2 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC38.86■■■■□ 3.81
SNAPC4Q5SXM2 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC38.85■■■■□ 3.81
SNAPC4Q5SXM2 SERBP1P1-201ENST00000396021 1160 ntBASIC38.85■■■■□ 3.81
SNAPC4Q5SXM2 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC38.85■■■■□ 3.81
SNAPC4Q5SXM2 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC38.84■■■■□ 3.81
SNAPC4Q5SXM2 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC38.84■■■■□ 3.81
SNAPC4Q5SXM2 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC38.84■■■■□ 3.81
SNAPC4Q5SXM2 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC38.84■■■■□ 3.81
SNAPC4Q5SXM2 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC38.84■■■■□ 3.81
SNAPC4Q5SXM2 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC38.83■■■■□ 3.81
SNAPC4Q5SXM2 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC38.82■■■■□ 3.81
SNAPC4Q5SXM2 RHOF-204ENST00000537265 699 ntTSL 2 BASIC38.82■■■■□ 3.81
SNAPC4Q5SXM2 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC38.82■■■■□ 3.81
SNAPC4Q5SXM2 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC38.82■■■■□ 3.8
SNAPC4Q5SXM2 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC38.82■■■■□ 3.8
SNAPC4Q5SXM2 SYT6-210ENST00000641643 1587 ntBASIC38.82■■■■□ 3.8
SNAPC4Q5SXM2 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC38.81■■■■□ 3.8
SNAPC4Q5SXM2 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC38.81■■■■□ 3.8
SNAPC4Q5SXM2 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC38.8■■■■□ 3.8
SNAPC4Q5SXM2 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC38.8■■■■□ 3.8
SNAPC4Q5SXM2 AC092437.1-201ENST00000624794 1048 ntBASIC38.8■■■■□ 3.8
SNAPC4Q5SXM2 IRS3P-201ENST00000223076 1006 ntBASIC38.79■■■■□ 3.8
SNAPC4Q5SXM2 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC38.79■■■■□ 3.8
SNAPC4Q5SXM2 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC38.79■■■■□ 3.8
SNAPC4Q5SXM2 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC38.79■■■■□ 3.8
SNAPC4Q5SXM2 PTCHD3P2-201ENST00000424937 1205 ntBASIC38.79■■■■□ 3.8
SNAPC4Q5SXM2 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC38.79■■■■□ 3.8
SNAPC4Q5SXM2 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC38.79■■■■□ 3.8
SNAPC4Q5SXM2 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC38.79■■■■□ 3.8
SNAPC4Q5SXM2 HACD1-201ENST00000326961 773 ntTSL 2 BASIC38.79■■■■□ 3.8
SNAPC4Q5SXM2 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC38.79■■■■□ 3.8
SNAPC4Q5SXM2 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC38.78■■■■□ 3.8
SNAPC4Q5SXM2 LBH-205ENST00000407930 756 ntTSL 2 BASIC38.78■■■■□ 3.8
SNAPC4Q5SXM2 AC090877.2-201ENST00000558441 1738 ntBASIC38.78■■■■□ 3.8
SNAPC4Q5SXM2 ASB1-202ENST00000409297 878 ntTSL 5 BASIC38.77■■■■□ 3.8
SNAPC4Q5SXM2 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC38.77■■■■□ 3.8
SNAPC4Q5SXM2 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC38.77■■■■□ 3.8
SNAPC4Q5SXM2 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC38.76■■■■□ 3.8
SNAPC4Q5SXM2 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC38.76■■■■□ 3.8
SNAPC4Q5SXM2 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC38.76■■■■□ 3.8
SNAPC4Q5SXM2 AP004609.3-201ENST00000610705 1884 ntBASIC38.76■■■■□ 3.8
SNAPC4Q5SXM2 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC38.76■■■■□ 3.8
SNAPC4Q5SXM2 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC38.75■■■■□ 3.79
SNAPC4Q5SXM2 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC38.75■■■■□ 3.79
SNAPC4Q5SXM2 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC38.75■■■■□ 3.79
SNAPC4Q5SXM2 SP2-202ENST00000613139 908 ntTSL 5 BASIC38.75■■■■□ 3.79
SNAPC4Q5SXM2 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC38.75■■■■□ 3.79
SNAPC4Q5SXM2 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC38.75■■■■□ 3.79
SNAPC4Q5SXM2 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC38.74■■■■□ 3.79
SNAPC4Q5SXM2 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC38.74■■■■□ 3.79
SNAPC4Q5SXM2 AC099791.1-201ENST00000416440 715 ntBASIC38.74■■■■□ 3.79
SNAPC4Q5SXM2 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC38.74■■■■□ 3.79
SNAPC4Q5SXM2 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC38.74■■■■□ 3.79
SNAPC4Q5SXM2 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC38.74■■■■□ 3.79
SNAPC4Q5SXM2 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC38.74■■■■□ 3.79
SNAPC4Q5SXM2 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC38.74■■■■□ 3.79
SNAPC4Q5SXM2 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC38.73■■■■□ 3.79
SNAPC4Q5SXM2 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC38.73■■■■□ 3.79
SNAPC4Q5SXM2 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC38.73■■■■□ 3.79
SNAPC4Q5SXM2 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC38.73■■■■□ 3.79
SNAPC4Q5SXM2 KRT18P5-201ENST00000436075 1291 ntBASIC38.73■■■■□ 3.79
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms