Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC28.33■■■□□ 2.13
PDS5AQ29RF7 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
PDS5AQ29RF7 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC28.33■■■□□ 2.13
PDS5AQ29RF7 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC28.33■■■□□ 2.13
PDS5AQ29RF7 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC28.33■■■□□ 2.13
PDS5AQ29RF7 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC28.33■■■□□ 2.13
PDS5AQ29RF7 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC28.33■■■□□ 2.13
PDS5AQ29RF7 SNX5-217ENST00000606557 1087 ntBASIC28.32■■■□□ 2.12
PDS5AQ29RF7 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC28.32■■■□□ 2.12
PDS5AQ29RF7 SLC6A10P-202ENST00000431994 2058 ntBASIC28.31■■■□□ 2.12
PDS5AQ29RF7 LSM4-201ENST00000252816 986 ntTSL 2 BASIC28.31■■■□□ 2.12
PDS5AQ29RF7 MIR6724-1-201ENST00000616420 92 ntBASIC28.31■■■□□ 2.12
PDS5AQ29RF7 MIR6724-2-201ENST00000616483 92 ntBASIC28.31■■■□□ 2.12
PDS5AQ29RF7 MIR6724-4-201ENST00000617390 92 ntBASIC28.31■■■□□ 2.12
PDS5AQ29RF7 MIR6724-3-201ENST00000622482 92 ntBASIC28.31■■■□□ 2.12
PDS5AQ29RF7 EXOG-217ENST00000630638 197 ntTSL 5 BASIC28.31■■■□□ 2.12
PDS5AQ29RF7 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
PDS5AQ29RF7 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
PDS5AQ29RF7 LBH-205ENST00000407930 756 ntTSL 2 BASIC28.3■■■□□ 2.12
PDS5AQ29RF7 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC28.3■■■□□ 2.12
PDS5AQ29RF7 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC28.3■■■□□ 2.12
PDS5AQ29RF7 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC28.3■■■□□ 2.12
PDS5AQ29RF7 CLTA-210ENST00000540080 989 ntTSL 2 BASIC28.3■■■□□ 2.12
PDS5AQ29RF7 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC28.3■■■□□ 2.12
PDS5AQ29RF7 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC28.3■■■□□ 2.12
PDS5AQ29RF7 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC28.3■■■□□ 2.12
PDS5AQ29RF7 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC28.3■■■□□ 2.12
PDS5AQ29RF7 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC28.29■■■□□ 2.12
PDS5AQ29RF7 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
PDS5AQ29RF7 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC28.29■■■□□ 2.12
PDS5AQ29RF7 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
PDS5AQ29RF7 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC28.28■■■□□ 2.12
PDS5AQ29RF7 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC28.28■■■□□ 2.12
PDS5AQ29RF7 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC28.28■■■□□ 2.12
PDS5AQ29RF7 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC28.28■■■□□ 2.12
PDS5AQ29RF7 AL117332.1-201ENST00000622628 974 ntBASIC28.27■■■□□ 2.12
PDS5AQ29RF7 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC28.27■■■□□ 2.12
PDS5AQ29RF7 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC28.26■■■□□ 2.12
PDS5AQ29RF7 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC28.26■■■□□ 2.11
PDS5AQ29RF7 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC28.26■■■□□ 2.11
PDS5AQ29RF7 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
PDS5AQ29RF7 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC28.25■■■□□ 2.11
PDS5AQ29RF7 MIR3621-201ENST00000580529 85 ntBASIC28.25■■■□□ 2.11
PDS5AQ29RF7 MIR6722-201ENST00000617286 78 ntBASIC28.25■■■□□ 2.11
PDS5AQ29RF7 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC28.25■■■□□ 2.11
PDS5AQ29RF7 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC28.24■■■□□ 2.11
PDS5AQ29RF7 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC28.24■■■□□ 2.11
PDS5AQ29RF7 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
PDS5AQ29RF7 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
PDS5AQ29RF7 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC28.23■■■□□ 2.11
PDS5AQ29RF7 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC28.23■■■□□ 2.11
PDS5AQ29RF7 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
PDS5AQ29RF7 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
PDS5AQ29RF7 LSM7-203ENST00000585409 512 ntTSL 2 BASIC28.21■■■□□ 2.11
PDS5AQ29RF7 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC28.21■■■□□ 2.11
PDS5AQ29RF7 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
PDS5AQ29RF7 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC28.21■■■□□ 2.11
PDS5AQ29RF7 CD72-202ENST00000378430 585 ntTSL 3 BASIC28.2■■■□□ 2.11
PDS5AQ29RF7 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC28.2■■■□□ 2.11
PDS5AQ29RF7 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC28.2■■■□□ 2.1
PDS5AQ29RF7 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC28.2■■■□□ 2.1
PDS5AQ29RF7 RPP21-222ENST00000433076 577 ntTSL 2 BASIC28.19■■■□□ 2.1
PDS5AQ29RF7 CLTA-206ENST00000466396 695 ntTSL 2 BASIC28.19■■■□□ 2.1
PDS5AQ29RF7 AC131281.2-201ENST00000520478 145 ntBASIC28.19■■■□□ 2.1
PDS5AQ29RF7 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC28.19■■■□□ 2.1
PDS5AQ29RF7 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC28.19■■■□□ 2.1
PDS5AQ29RF7 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC28.19■■■□□ 2.1
PDS5AQ29RF7 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC28.19■■■□□ 2.1
PDS5AQ29RF7 CEBPA-AS1-201ENST00000592982 2198 ntBASIC28.19■■■□□ 2.1
PDS5AQ29RF7 AC008406.3-201ENST00000620001 1374 ntBASIC28.19■■■□□ 2.1
PDS5AQ29RF7 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC28.19■■■□□ 2.1
PDS5AQ29RF7 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC28.19■■■□□ 2.1
PDS5AQ29RF7 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC28.19■■■□□ 2.1
PDS5AQ29RF7 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC28.18■■■□□ 2.1
PDS5AQ29RF7 AC004448.1-201ENST00000458332 883 ntBASIC28.18■■■□□ 2.1
PDS5AQ29RF7 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC28.18■■■□□ 2.1
PDS5AQ29RF7 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC28.18■■■□□ 2.1
PDS5AQ29RF7 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC28.18■■■□□ 2.1
PDS5AQ29RF7 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
PDS5AQ29RF7 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC28.18■■■□□ 2.1
PDS5AQ29RF7 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC28.18■■■□□ 2.1
PDS5AQ29RF7 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
PDS5AQ29RF7 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC28.18■■■□□ 2.1
PDS5AQ29RF7 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
PDS5AQ29RF7 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
PDS5AQ29RF7 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
PDS5AQ29RF7 TFPT-201ENST00000391757 774 ntTSL 5 BASIC28.17■■■□□ 2.1
PDS5AQ29RF7 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC28.17■■■□□ 2.1
PDS5AQ29RF7 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC28.17■■■□□ 2.1
PDS5AQ29RF7 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC28.16■■■□□ 2.1
PDS5AQ29RF7 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
PDS5AQ29RF7 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
PDS5AQ29RF7 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
PDS5AQ29RF7 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
PDS5AQ29RF7 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC28.16■■■□□ 2.1
PDS5AQ29RF7 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
PDS5AQ29RF7 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC28.15■■■□□ 2.1
PDS5AQ29RF7 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC28.15■■■□□ 2.1
PDS5AQ29RF7 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC28.15■■■□□ 2.1
PDS5AQ29RF7 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms