Protein–RNA interactions for Protein: P78345

RPP38, Ribonuclease P protein subunit p38, humanhuman

Known RBP Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPP38P78345 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
RPP38P78345 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RPP38P78345 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RPP38P78345 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RPP38P78345 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
RPP38P78345 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC21.96■■□□□ 1.11
RPP38P78345 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RPP38P78345 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC21.95■■□□□ 1.11
RPP38P78345 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC21.95■■□□□ 1.11
RPP38P78345 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC21.95■■□□□ 1.1
RPP38P78345 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.95■■□□□ 1.1
RPP38P78345 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RPP38P78345 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RPP38P78345 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RPP38P78345 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
RPP38P78345 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RPP38P78345 MTX2-204ENST00000443241 799 ntTSL 3 BASIC21.95■■□□□ 1.1
RPP38P78345 EED-207ENST00000528180 1745 ntTSL 5 BASIC21.94■■□□□ 1.1
RPP38P78345 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RPP38P78345 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RPP38P78345 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RPP38P78345 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.94■■□□□ 1.1
RPP38P78345 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
RPP38P78345 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RPP38P78345 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RPP38P78345 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RPP38P78345 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RPP38P78345 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
RPP38P78345 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.94■■□□□ 1.1
RPP38P78345 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
RPP38P78345 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC21.93■■□□□ 1.1
RPP38P78345 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC21.93■■□□□ 1.1
RPP38P78345 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
RPP38P78345 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RPP38P78345 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RPP38P78345 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RPP38P78345 AP003733.4-201ENST00000623785 1697 ntBASIC21.92■■□□□ 1.1
RPP38P78345 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC21.92■■□□□ 1.1
RPP38P78345 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC21.92■■□□□ 1.1
RPP38P78345 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RPP38P78345 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RPP38P78345 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC21.92■■□□□ 1.1
RPP38P78345 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC21.92■■□□□ 1.1
RPP38P78345 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RPP38P78345 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.92■■□□□ 1.1
RPP38P78345 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC21.92■■□□□ 1.1
RPP38P78345 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RPP38P78345 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RPP38P78345 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
RPP38P78345 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
RPP38P78345 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC21.91■■□□□ 1.1
RPP38P78345 AC019171.1-201ENST00000601251 1056 ntBASIC21.91■■□□□ 1.1
RPP38P78345 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RPP38P78345 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
RPP38P78345 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RPP38P78345 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RPP38P78345 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.9■■□□□ 1.1
RPP38P78345 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RPP38P78345 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC21.9■■□□□ 1.1
RPP38P78345 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RPP38P78345 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RPP38P78345 AC012676.1-201ENST00000574705 1949 ntBASIC21.9■■□□□ 1.1
RPP38P78345 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RPP38P78345 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
RPP38P78345 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC21.89■■□□□ 1.1
RPP38P78345 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
RPP38P78345 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
RPP38P78345 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC21.89■■□□□ 1.09
RPP38P78345 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC21.89■■□□□ 1.09
RPP38P78345 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC21.89■■□□□ 1.09
RPP38P78345 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RPP38P78345 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RPP38P78345 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
RPP38P78345 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RPP38P78345 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC21.89■■□□□ 1.09
RPP38P78345 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RPP38P78345 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RPP38P78345 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC21.88■■□□□ 1.09
RPP38P78345 AC010980.1-201ENST00000587192 1142 ntBASIC21.88■■□□□ 1.09
RPP38P78345 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RPP38P78345 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RPP38P78345 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RPP38P78345 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
RPP38P78345 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RPP38P78345 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RPP38P78345 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
RPP38P78345 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
RPP38P78345 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
RPP38P78345 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
RPP38P78345 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RPP38P78345 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
RPP38P78345 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC21.87■■□□□ 1.09
RPP38P78345 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC21.87■■□□□ 1.09
RPP38P78345 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
RPP38P78345 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
RPP38P78345 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
RPP38P78345 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RPP38P78345 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RPP38P78345 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC21.86■■□□□ 1.09
RPP38P78345 LONRF2P2-201ENST00000439212 571 ntBASIC21.86■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms