Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC19.89■□□□□ 0.77
UBA52P62987 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC19.89■□□□□ 0.77
UBA52P62987 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC19.88■□□□□ 0.77
UBA52P62987 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
UBA52P62987 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC19.88■□□□□ 0.77
UBA52P62987 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
UBA52P62987 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
UBA52P62987 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC19.88■□□□□ 0.77
UBA52P62987 AC010980.1-201ENST00000587192 1142 ntBASIC19.88■□□□□ 0.77
UBA52P62987 RAP2CP1-202ENST00000605179 643 ntBASIC19.88■□□□□ 0.77
UBA52P62987 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
UBA52P62987 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
UBA52P62987 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
UBA52P62987 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
UBA52P62987 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
UBA52P62987 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
UBA52P62987 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.87■□□□□ 0.77
UBA52P62987 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
UBA52P62987 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
UBA52P62987 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
UBA52P62987 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
UBA52P62987 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
UBA52P62987 AC074183.2-201ENST00000623112 922 ntBASIC19.87■□□□□ 0.77
UBA52P62987 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
UBA52P62987 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
UBA52P62987 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
UBA52P62987 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
UBA52P62987 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
UBA52P62987 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.86■□□□□ 0.77
UBA52P62987 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
UBA52P62987 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC19.86■□□□□ 0.77
UBA52P62987 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC19.86■□□□□ 0.77
UBA52P62987 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
UBA52P62987 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC19.86■□□□□ 0.77
UBA52P62987 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC19.86■□□□□ 0.77
UBA52P62987 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
UBA52P62987 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
UBA52P62987 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC19.86■□□□□ 0.77
UBA52P62987 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
UBA52P62987 DUSP8P5-201ENST00000422884 1815 ntBASIC19.86■□□□□ 0.77
UBA52P62987 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC19.85■□□□□ 0.77
UBA52P62987 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
UBA52P62987 KRT8P33-201ENST00000508125 1423 ntBASIC19.85■□□□□ 0.77
UBA52P62987 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC19.85■□□□□ 0.77
UBA52P62987 SPCS2P3-201ENST00000500401 656 ntBASIC19.85■□□□□ 0.77
UBA52P62987 AC139795.1-202ENST00000500444 432 ntBASIC19.85■□□□□ 0.77
UBA52P62987 MIR3960-201ENST00000583311 91 ntBASIC19.85■□□□□ 0.77
UBA52P62987 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
UBA52P62987 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
UBA52P62987 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
UBA52P62987 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
UBA52P62987 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC19.84■□□□□ 0.77
UBA52P62987 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
UBA52P62987 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
UBA52P62987 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
UBA52P62987 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC19.84■□□□□ 0.77
UBA52P62987 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
UBA52P62987 PFN2-211ENST00000489155 636 ntTSL 4 BASIC19.84■□□□□ 0.77
UBA52P62987 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
UBA52P62987 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
UBA52P62987 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
UBA52P62987 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
UBA52P62987 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
UBA52P62987 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
UBA52P62987 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC19.83■□□□□ 0.77
UBA52P62987 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
UBA52P62987 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
UBA52P62987 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
UBA52P62987 MIR6765-201ENST00000614092 87 ntBASIC19.83■□□□□ 0.77
UBA52P62987 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
UBA52P62987 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
UBA52P62987 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
UBA52P62987 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
UBA52P62987 LINC01124-201ENST00000409786 2117 ntBASIC19.82■□□□□ 0.76
UBA52P62987 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
UBA52P62987 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
UBA52P62987 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
UBA52P62987 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC19.82■□□□□ 0.76
UBA52P62987 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC19.82■□□□□ 0.76
UBA52P62987 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC19.82■□□□□ 0.76
UBA52P62987 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
UBA52P62987 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
UBA52P62987 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
UBA52P62987 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
UBA52P62987 HYI-210ENST00000486909 905 ntTSL 5 BASIC19.81■□□□□ 0.76
UBA52P62987 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
UBA52P62987 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
UBA52P62987 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
UBA52P62987 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
UBA52P62987 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
UBA52P62987 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
UBA52P62987 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.8■□□□□ 0.76
UBA52P62987 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
UBA52P62987 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
UBA52P62987 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
UBA52P62987 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
UBA52P62987 AC142472.1-201ENST00000612013 1741 ntBASIC19.8■□□□□ 0.76
UBA52P62987 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
UBA52P62987 YBX1P4-201ENST00000392794 808 ntBASIC19.8■□□□□ 0.76
UBA52P62987 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms