Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC23.19■■□□□ 1.3
CLDN2P57739 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC23.19■■□□□ 1.3
CLDN2P57739 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CLDN2P57739 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC23.19■■□□□ 1.3
CLDN2P57739 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC23.19■■□□□ 1.3
CLDN2P57739 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
CLDN2P57739 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CLDN2P57739 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC23.18■■□□□ 1.3
CLDN2P57739 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC23.18■■□□□ 1.3
CLDN2P57739 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC23.18■■□□□ 1.3
CLDN2P57739 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC23.18■■□□□ 1.3
CLDN2P57739 MIR6724-1-201ENST00000616420 92 ntBASIC23.18■■□□□ 1.3
CLDN2P57739 MIR6724-2-201ENST00000616483 92 ntBASIC23.18■■□□□ 1.3
CLDN2P57739 MIR6724-4-201ENST00000617390 92 ntBASIC23.18■■□□□ 1.3
CLDN2P57739 MIR6724-3-201ENST00000622482 92 ntBASIC23.18■■□□□ 1.3
CLDN2P57739 AL117332.1-201ENST00000622628 974 ntBASIC23.18■■□□□ 1.3
CLDN2P57739 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CLDN2P57739 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CLDN2P57739 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CLDN2P57739 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CLDN2P57739 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CLDN2P57739 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC23.16■■□□□ 1.3
CLDN2P57739 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
CLDN2P57739 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC23.16■■□□□ 1.3
CLDN2P57739 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC23.16■■□□□ 1.3
CLDN2P57739 RPP21-222ENST00000433076 577 ntTSL 2 BASIC23.16■■□□□ 1.3
CLDN2P57739 AC131281.2-201ENST00000520478 145 ntBASIC23.16■■□□□ 1.3
CLDN2P57739 EXOG-217ENST00000630638 197 ntTSL 5 BASIC23.16■■□□□ 1.3
CLDN2P57739 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC23.16■■□□□ 1.3
CLDN2P57739 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CLDN2P57739 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC23.15■■□□□ 1.3
CLDN2P57739 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CLDN2P57739 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC23.15■■□□□ 1.3
CLDN2P57739 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC23.15■■□□□ 1.3
CLDN2P57739 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CLDN2P57739 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC23.15■■□□□ 1.3
CLDN2P57739 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CLDN2P57739 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC23.14■■□□□ 1.3
CLDN2P57739 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
CLDN2P57739 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC23.14■■□□□ 1.3
CLDN2P57739 AC019069.1-201ENST00000610008 1333 ntBASIC23.14■■□□□ 1.3
CLDN2P57739 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
CLDN2P57739 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC23.14■■□□□ 1.29
CLDN2P57739 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CLDN2P57739 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC23.14■■□□□ 1.29
CLDN2P57739 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC23.14■■□□□ 1.29
CLDN2P57739 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC23.14■■□□□ 1.29
CLDN2P57739 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CLDN2P57739 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
CLDN2P57739 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC23.14■■□□□ 1.29
CLDN2P57739 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CLDN2P57739 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CLDN2P57739 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC23.13■■□□□ 1.29
CLDN2P57739 MIR3621-201ENST00000580529 85 ntBASIC23.13■■□□□ 1.29
CLDN2P57739 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC23.13■■□□□ 1.29
CLDN2P57739 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC23.13■■□□□ 1.29
CLDN2P57739 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
CLDN2P57739 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
CLDN2P57739 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC23.12■■□□□ 1.29
CLDN2P57739 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC23.12■■□□□ 1.29
CLDN2P57739 CD72-202ENST00000378430 585 ntTSL 3 BASIC23.12■■□□□ 1.29
CLDN2P57739 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC23.12■■□□□ 1.29
CLDN2P57739 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC23.12■■□□□ 1.29
CLDN2P57739 AC091060.1-201ENST00000623524 1766 ntBASIC23.12■■□□□ 1.29
CLDN2P57739 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC23.11■■□□□ 1.29
CLDN2P57739 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
CLDN2P57739 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
CLDN2P57739 SNX5-217ENST00000606557 1087 ntBASIC23.11■■□□□ 1.29
CLDN2P57739 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CLDN2P57739 DUSP8P4-201ENST00000399538 1761 ntBASIC23.1■■□□□ 1.29
CLDN2P57739 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC23.1■■□□□ 1.29
CLDN2P57739 AL356740.2-201ENST00000601559 647 ntBASIC23.1■■□□□ 1.29
CLDN2P57739 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
CLDN2P57739 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC23.09■■□□□ 1.29
CLDN2P57739 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC23.09■■□□□ 1.29
CLDN2P57739 AL136116.3-201ENST00000402907 1138 ntBASIC23.09■■□□□ 1.29
CLDN2P57739 AK3-203ENST00000447596 705 ntTSL 2 BASIC23.09■■□□□ 1.29
CLDN2P57739 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
CLDN2P57739 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC23.09■■□□□ 1.29
CLDN2P57739 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CLDN2P57739 SLC6A10P-202ENST00000431994 2058 ntBASIC23.09■■□□□ 1.29
CLDN2P57739 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
CLDN2P57739 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
CLDN2P57739 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
CLDN2P57739 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC23.08■■□□□ 1.29
CLDN2P57739 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC23.08■■□□□ 1.29
CLDN2P57739 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.29
CLDN2P57739 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CLDN2P57739 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CLDN2P57739 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC23.07■■□□□ 1.28
CLDN2P57739 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CLDN2P57739 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC23.07■■□□□ 1.28
CLDN2P57739 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
CLDN2P57739 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
CLDN2P57739 LBH-205ENST00000407930 756 ntTSL 2 BASIC23.07■■□□□ 1.28
CLDN2P57739 CLTA-206ENST00000466396 695 ntTSL 2 BASIC23.07■■□□□ 1.28
CLDN2P57739 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC23.07■■□□□ 1.28
CLDN2P57739 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC23.07■■□□□ 1.28
CLDN2P57739 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC23.07■■□□□ 1.28
CLDN2P57739 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms