Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CLDN20P56880 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CLDN20P56880 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CLDN20P56880 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CLDN20P56880 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CLDN20P56880 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CLDN20P56880 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CLDN20P56880 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC21.33■■□□□ 1
CLDN20P56880 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.32■■□□□ 1
CLDN20P56880 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CLDN20P56880 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC21.32■■□□□ 1
CLDN20P56880 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC21.32■■□□□ 1
CLDN20P56880 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC21.32■■□□□ 1
CLDN20P56880 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
CLDN20P56880 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
CLDN20P56880 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.32■■□□□ 1
CLDN20P56880 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CLDN20P56880 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC21.31■■□□□ 1
CLDN20P56880 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21.31■■□□□ 1
CLDN20P56880 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.31■■□□□ 1
CLDN20P56880 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC21.31■■□□□ 1
CLDN20P56880 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC21.31■■□□□ 1
CLDN20P56880 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC21.31■■□□□ 1
CLDN20P56880 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CLDN20P56880 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC21.31■■□□□ 1
CLDN20P56880 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.31■■□□□ 1
CLDN20P56880 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CLDN20P56880 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC21.3■■□□□ 1
CLDN20P56880 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC21.3■■□□□ 1
CLDN20P56880 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CLDN20P56880 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
CLDN20P56880 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CLDN20P56880 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC21.3■■□□□ 1
CLDN20P56880 AC103724.3-201ENST00000564481 992 ntBASIC21.3■■□□□ 1
CLDN20P56880 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CLDN20P56880 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC21.3■■□□□ 1
CLDN20P56880 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CLDN20P56880 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC21.3■■□□□ 1
CLDN20P56880 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
CLDN20P56880 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC21.3■■□□□ 1
CLDN20P56880 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC21.29■■□□□ 1
CLDN20P56880 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC21.29■■□□□ 1
CLDN20P56880 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC21.29■■□□□ 1
CLDN20P56880 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CLDN20P56880 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
CLDN20P56880 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC21.29■■□□□ 1
CLDN20P56880 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CLDN20P56880 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CLDN20P56880 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CLDN20P56880 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC21.28■■□□□ 1
CLDN20P56880 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC21.28■■□□□ 1
CLDN20P56880 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC21.28■■□□□ 1
CLDN20P56880 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
CLDN20P56880 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC21.28■■□□□ 1
CLDN20P56880 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CLDN20P56880 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CLDN20P56880 FOXO3B-201ENST00000395675 1928 ntBASIC21.27■■□□□ 1
CLDN20P56880 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CLDN20P56880 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
CLDN20P56880 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC21.27■■□□□ 1
CLDN20P56880 AC022616.5-201ENST00000518796 181 ntBASIC21.27■■□□□ 1
CLDN20P56880 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC21.27■■□□□ 1
CLDN20P56880 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
CLDN20P56880 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
CLDN20P56880 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC21.26■□□□□ 0.99
CLDN20P56880 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC21.26■□□□□ 0.99
CLDN20P56880 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
CLDN20P56880 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CLDN20P56880 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
CLDN20P56880 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CLDN20P56880 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
CLDN20P56880 AL592295.1-201ENST00000400984 884 ntBASIC21.26■□□□□ 0.99
CLDN20P56880 AL451085.2-201ENST00000605085 799 ntBASIC21.26■□□□□ 0.99
CLDN20P56880 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.26■□□□□ 0.99
CLDN20P56880 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CLDN20P56880 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.26■□□□□ 0.99
CLDN20P56880 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CLDN20P56880 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CLDN20P56880 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC21.25■□□□□ 0.99
CLDN20P56880 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CLDN20P56880 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CLDN20P56880 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CLDN20P56880 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC21.25■□□□□ 0.99
CLDN20P56880 PREB-202ENST00000406567 1910 ntTSL 5 BASIC21.25■□□□□ 0.99
CLDN20P56880 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC21.25■□□□□ 0.99
CLDN20P56880 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CLDN20P56880 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
CLDN20P56880 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CLDN20P56880 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC21.24■□□□□ 0.99
CLDN20P56880 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CLDN20P56880 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CLDN20P56880 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.24■□□□□ 0.99
CLDN20P56880 AL031848.2-201ENST00000607670 837 ntBASIC21.24■□□□□ 0.99
CLDN20P56880 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
CLDN20P56880 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC21.24■□□□□ 0.99
CLDN20P56880 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CLDN20P56880 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC21.24■□□□□ 0.99
CLDN20P56880 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
CLDN20P56880 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CLDN20P56880 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms