Protein–RNA interactions for Protein: P56539

CAV3, Caveolin-3, humanhuman

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAV3P56539 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CAV3P56539 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.69■□□□□ 0.9
CAV3P56539 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.69■□□□□ 0.9
CAV3P56539 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
CAV3P56539 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CAV3P56539 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CAV3P56539 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CAV3P56539 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC20.68■□□□□ 0.9
CAV3P56539 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CAV3P56539 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CAV3P56539 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.68■□□□□ 0.9
CAV3P56539 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC20.68■□□□□ 0.9
CAV3P56539 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CAV3P56539 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
CAV3P56539 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CAV3P56539 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.67■□□□□ 0.9
CAV3P56539 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.67■□□□□ 0.9
CAV3P56539 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CAV3P56539 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CAV3P56539 AC126177.7-201ENST00000547904 679 ntBASIC20.67■□□□□ 0.9
CAV3P56539 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CAV3P56539 SRP68-213ENST00000629930 165 ntTSL 5 BASIC20.67■□□□□ 0.9
CAV3P56539 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC20.67■□□□□ 0.9
CAV3P56539 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
CAV3P56539 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CAV3P56539 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CAV3P56539 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
CAV3P56539 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
CAV3P56539 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CAV3P56539 TPT1-202ENST00000379055 948 ntTSL 2 BASIC20.66■□□□□ 0.9
CAV3P56539 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CAV3P56539 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CAV3P56539 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CAV3P56539 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
CAV3P56539 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.65■□□□□ 0.9
CAV3P56539 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.65■□□□□ 0.9
CAV3P56539 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
CAV3P56539 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.65■□□□□ 0.9
CAV3P56539 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CAV3P56539 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.65■□□□□ 0.9
CAV3P56539 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CAV3P56539 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
CAV3P56539 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC20.65■□□□□ 0.9
CAV3P56539 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC20.65■□□□□ 0.9
CAV3P56539 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CAV3P56539 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC20.64■□□□□ 0.89
CAV3P56539 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CAV3P56539 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CAV3P56539 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CAV3P56539 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.63■□□□□ 0.89
CAV3P56539 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CAV3P56539 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
CAV3P56539 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
CAV3P56539 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
CAV3P56539 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CAV3P56539 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
CAV3P56539 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.63■□□□□ 0.89
CAV3P56539 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
CAV3P56539 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC20.62■□□□□ 0.89
CAV3P56539 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CAV3P56539 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CAV3P56539 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.62■□□□□ 0.89
CAV3P56539 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CAV3P56539 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CAV3P56539 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC20.62■□□□□ 0.89
CAV3P56539 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
CAV3P56539 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC20.62■□□□□ 0.89
CAV3P56539 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CAV3P56539 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CAV3P56539 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC20.62■□□□□ 0.89
CAV3P56539 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CAV3P56539 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.61■□□□□ 0.89
CAV3P56539 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CAV3P56539 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CAV3P56539 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
CAV3P56539 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CAV3P56539 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CAV3P56539 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CAV3P56539 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.61■□□□□ 0.89
CAV3P56539 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CAV3P56539 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CAV3P56539 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.6■□□□□ 0.89
CAV3P56539 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CAV3P56539 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CAV3P56539 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CAV3P56539 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CAV3P56539 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CAV3P56539 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CAV3P56539 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.6■□□□□ 0.89
CAV3P56539 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CAV3P56539 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CAV3P56539 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.59■□□□□ 0.89
CAV3P56539 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC20.59■□□□□ 0.89
CAV3P56539 MED25-210ENST00000612854 801 ntTSL 5 BASIC20.59■□□□□ 0.89
CAV3P56539 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CAV3P56539 MED25-214ENST00000622402 642 ntTSL 5 BASIC20.59■□□□□ 0.89
CAV3P56539 AL359258.2-201ENST00000564063 1566 ntBASIC20.59■□□□□ 0.89
CAV3P56539 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
CAV3P56539 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.58■□□□□ 0.89
CAV3P56539 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms