Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
SLC25A1P53007 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SLC25A1P53007 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
SLC25A1P53007 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SLC25A1P53007 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SLC25A1P53007 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SLC25A1P53007 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
SLC25A1P53007 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLC25A1P53007 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC20.75■□□□□ 0.91
SLC25A1P53007 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
SLC25A1P53007 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
SLC25A1P53007 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
SLC25A1P53007 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLC25A1P53007 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC20.75■□□□□ 0.91
SLC25A1P53007 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
SLC25A1P53007 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLC25A1P53007 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
SLC25A1P53007 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLC25A1P53007 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLC25A1P53007 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC20.75■□□□□ 0.91
SLC25A1P53007 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.75■□□□□ 0.91
SLC25A1P53007 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SLC25A1P53007 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SLC25A1P53007 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC20.74■□□□□ 0.91
SLC25A1P53007 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SLC25A1P53007 RNF126P1-201ENST00000567452 1320 ntBASIC20.74■□□□□ 0.91
SLC25A1P53007 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SLC25A1P53007 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SLC25A1P53007 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SLC25A1P53007 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
SLC25A1P53007 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
SLC25A1P53007 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SLC25A1P53007 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SLC25A1P53007 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SLC25A1P53007 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.73■□□□□ 0.91
SLC25A1P53007 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SLC25A1P53007 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SLC25A1P53007 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
SLC25A1P53007 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SLC25A1P53007 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SLC25A1P53007 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SLC25A1P53007 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SLC25A1P53007 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SLC25A1P53007 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SLC25A1P53007 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
SLC25A1P53007 ABCB10P4-201ENST00000566803 2184 ntBASIC20.72■□□□□ 0.91
SLC25A1P53007 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SLC25A1P53007 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SLC25A1P53007 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC20.71■□□□□ 0.91
SLC25A1P53007 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
SLC25A1P53007 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC20.71■□□□□ 0.91
SLC25A1P53007 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SLC25A1P53007 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SLC25A1P53007 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
SLC25A1P53007 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SLC25A1P53007 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC20.7■□□□□ 0.9
SLC25A1P53007 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC20.7■□□□□ 0.9
SLC25A1P53007 RPS2P7-201ENST00000447334 885 ntBASIC20.7■□□□□ 0.9
SLC25A1P53007 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC20.7■□□□□ 0.9
SLC25A1P53007 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
SLC25A1P53007 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
SLC25A1P53007 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
SLC25A1P53007 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SLC25A1P53007 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
SLC25A1P53007 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SLC25A1P53007 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20.69■□□□□ 0.9
SLC25A1P53007 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SLC25A1P53007 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.69■□□□□ 0.9
SLC25A1P53007 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SLC25A1P53007 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC20.69■□□□□ 0.9
SLC25A1P53007 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SLC25A1P53007 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
SLC25A1P53007 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SLC25A1P53007 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.69■□□□□ 0.9
SLC25A1P53007 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SLC25A1P53007 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SLC25A1P53007 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SLC25A1P53007 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SLC25A1P53007 AC018755.3-202ENST00000596210 929 ntBASIC20.68■□□□□ 0.9
SLC25A1P53007 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
SLC25A1P53007 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.68■□□□□ 0.9
SLC25A1P53007 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SLC25A1P53007 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SLC25A1P53007 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.67■□□□□ 0.9
SLC25A1P53007 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SLC25A1P53007 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
SLC25A1P53007 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.67■□□□□ 0.9
SLC25A1P53007 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SLC25A1P53007 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SLC25A1P53007 DUSP8P5-201ENST00000422884 1815 ntBASIC20.67■□□□□ 0.9
SLC25A1P53007 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SLC25A1P53007 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SLC25A1P53007 ABHD17AP3-201ENST00000503096 1137 ntBASIC20.66■□□□□ 0.9
SLC25A1P53007 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
SLC25A1P53007 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC20.66■□□□□ 0.9
SLC25A1P53007 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SLC25A1P53007 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.66■□□□□ 0.9
SLC25A1P53007 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.66■□□□□ 0.9
SLC25A1P53007 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
SLC25A1P53007 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms