Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SMSP52788 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SMSP52788 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SMSP52788 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SMSP52788 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC21.72■■□□□ 1.07
SMSP52788 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SMSP52788 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SMSP52788 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SMSP52788 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SMSP52788 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
SMSP52788 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
SMSP52788 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SMSP52788 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.72■■□□□ 1.07
SMSP52788 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SMSP52788 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.71■■□□□ 1.07
SMSP52788 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
SMSP52788 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SMSP52788 AL356441.2-201ENST00000443009 864 ntBASIC21.71■■□□□ 1.07
SMSP52788 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
SMSP52788 AP003733.4-201ENST00000623785 1697 ntBASIC21.71■■□□□ 1.07
SMSP52788 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC21.71■■□□□ 1.07
SMSP52788 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SMSP52788 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.71■■□□□ 1.07
SMSP52788 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SMSP52788 LTK-203ENST00000453182 2412 ntTSL 2 BASIC21.7■■□□□ 1.06
SMSP52788 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SMSP52788 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC21.7■■□□□ 1.06
SMSP52788 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC21.7■■□□□ 1.06
SMSP52788 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
SMSP52788 RNF146-205ENST00000477776 762 ntTSL 3 BASIC21.7■■□□□ 1.06
SMSP52788 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SMSP52788 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC21.7■■□□□ 1.06
SMSP52788 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SMSP52788 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC21.7■■□□□ 1.06
SMSP52788 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SMSP52788 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SMSP52788 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
SMSP52788 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SMSP52788 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SMSP52788 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC21.69■■□□□ 1.06
SMSP52788 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SMSP52788 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SMSP52788 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC21.69■■□□□ 1.06
SMSP52788 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SMSP52788 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC21.69■■□□□ 1.06
SMSP52788 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
SMSP52788 EED-207ENST00000528180 1745 ntTSL 5 BASIC21.69■■□□□ 1.06
SMSP52788 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SMSP52788 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
SMSP52788 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
SMSP52788 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC21.68■■□□□ 1.06
SMSP52788 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SMSP52788 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SMSP52788 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SMSP52788 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SMSP52788 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
SMSP52788 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SMSP52788 AC239859.2-201ENST00000444165 318 ntBASIC21.67■■□□□ 1.06
SMSP52788 AC087393.1-201ENST00000582896 145 ntBASIC21.67■■□□□ 1.06
SMSP52788 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.66■■□□□ 1.06
SMSP52788 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
SMSP52788 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SMSP52788 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SMSP52788 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
SMSP52788 Z92544.1-202ENST00000571933 1220 ntBASIC21.66■■□□□ 1.06
SMSP52788 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SMSP52788 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
SMSP52788 AC097639.1-201ENST00000565519 1891 ntBASIC21.66■■□□□ 1.06
SMSP52788 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SMSP52788 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SMSP52788 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.66■■□□□ 1.06
SMSP52788 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SMSP52788 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
SMSP52788 LINC01124-201ENST00000409786 2117 ntBASIC21.65■■□□□ 1.06
SMSP52788 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC21.65■■□□□ 1.06
SMSP52788 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SMSP52788 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SMSP52788 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
SMSP52788 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC21.65■■□□□ 1.06
SMSP52788 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
SMSP52788 TK2-216ENST00000564917 1156 ntTSL 3 BASIC21.65■■□□□ 1.06
SMSP52788 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SMSP52788 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.65■■□□□ 1.06
SMSP52788 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SMSP52788 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC21.64■■□□□ 1.06
SMSP52788 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
SMSP52788 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
SMSP52788 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
SMSP52788 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC21.64■■□□□ 1.05
SMSP52788 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC21.64■■□□□ 1.05
SMSP52788 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC21.64■■□□□ 1.05
SMSP52788 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC21.64■■□□□ 1.05
SMSP52788 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
SMSP52788 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SMSP52788 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
SMSP52788 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SMSP52788 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC21.64■■□□□ 1.05
SMSP52788 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SMSP52788 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC21.63■■□□□ 1.05
SMSP52788 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms