Protein–RNA interactions for Protein: P51148

RAB5C, Ras-related protein Rab-5C, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5CP51148 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC18.73■□□□□ 0.59
RAB5CP51148 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC18.73■□□□□ 0.59
RAB5CP51148 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC18.73■□□□□ 0.59
RAB5CP51148 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC18.73■□□□□ 0.59
RAB5CP51148 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RAB5CP51148 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RAB5CP51148 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RAB5CP51148 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC18.72■□□□□ 0.59
RAB5CP51148 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RAB5CP51148 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
RAB5CP51148 AL121603.2-201ENST00000557373 2117 ntBASIC18.72■□□□□ 0.59
RAB5CP51148 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RAB5CP51148 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RAB5CP51148 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC18.72■□□□□ 0.59
RAB5CP51148 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RAB5CP51148 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
RAB5CP51148 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
RAB5CP51148 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC18.71■□□□□ 0.59
RAB5CP51148 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC18.71■□□□□ 0.59
RAB5CP51148 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC18.71■□□□□ 0.59
RAB5CP51148 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC18.71■□□□□ 0.59
RAB5CP51148 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
RAB5CP51148 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
RAB5CP51148 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
RAB5CP51148 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
RAB5CP51148 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAB5CP51148 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAB5CP51148 AL391121.1-201ENST00000607967 1349 ntBASIC18.71■□□□□ 0.59
RAB5CP51148 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RAB5CP51148 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
RAB5CP51148 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC18.7■□□□□ 0.58
RAB5CP51148 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAB5CP51148 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
RAB5CP51148 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RAB5CP51148 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RAB5CP51148 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAB5CP51148 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAB5CP51148 AC108673.1-201ENST00000510422 1159 ntBASIC18.7■□□□□ 0.58
RAB5CP51148 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RAB5CP51148 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAB5CP51148 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RAB5CP51148 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC18.7■□□□□ 0.58
RAB5CP51148 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC18.7■□□□□ 0.58
RAB5CP51148 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC18.7■□□□□ 0.58
RAB5CP51148 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC18.7■□□□□ 0.58
RAB5CP51148 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAB5CP51148 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAB5CP51148 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAB5CP51148 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAB5CP51148 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC18.69■□□□□ 0.58
RAB5CP51148 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
RAB5CP51148 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RAB5CP51148 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAB5CP51148 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAB5CP51148 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
RAB5CP51148 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAB5CP51148 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAB5CP51148 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RAB5CP51148 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RAB5CP51148 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAB5CP51148 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RAB5CP51148 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC18.68■□□□□ 0.58
RAB5CP51148 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAB5CP51148 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
RAB5CP51148 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAB5CP51148 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAB5CP51148 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC18.68■□□□□ 0.58
RAB5CP51148 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAB5CP51148 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAB5CP51148 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC18.67■□□□□ 0.58
RAB5CP51148 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAB5CP51148 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC18.67■□□□□ 0.58
RAB5CP51148 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC18.67■□□□□ 0.58
RAB5CP51148 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RAB5CP51148 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC18.67■□□□□ 0.58
RAB5CP51148 USP48-205ENST00000421625 2818 ntTSL 2 BASIC18.67■□□□□ 0.58
RAB5CP51148 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAB5CP51148 LINC00526-201ENST00000581067 1875 ntBASIC18.67■□□□□ 0.58
RAB5CP51148 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAB5CP51148 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAB5CP51148 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAB5CP51148 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAB5CP51148 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAB5CP51148 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAB5CP51148 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
RAB5CP51148 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RAB5CP51148 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAB5CP51148 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
RAB5CP51148 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC18.66■□□□□ 0.58
RAB5CP51148 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
RAB5CP51148 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RAB5CP51148 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
RAB5CP51148 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RAB5CP51148 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC18.65■□□□□ 0.58
RAB5CP51148 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RAB5CP51148 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC18.65■□□□□ 0.58
RAB5CP51148 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RAB5CP51148 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RAB5CP51148 EFS-203ENST00000429593 2610 ntTSL 2 BASIC18.65■□□□□ 0.58
RAB5CP51148 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms