Protein–RNA interactions for Protein: P35625

TIMP3, Metalloproteinase inhibitor 3, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3P35625 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC20.74■□□□□ 0.91
TIMP3P35625 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
TIMP3P35625 LBH-205ENST00000407930 756 ntTSL 2 BASIC20.73■□□□□ 0.91
TIMP3P35625 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC20.73■□□□□ 0.91
TIMP3P35625 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.73■□□□□ 0.91
TIMP3P35625 MIR6722-201ENST00000617286 78 ntBASIC20.73■□□□□ 0.91
TIMP3P35625 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.73■□□□□ 0.91
TIMP3P35625 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
TIMP3P35625 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
TIMP3P35625 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC20.72■□□□□ 0.91
TIMP3P35625 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC20.72■□□□□ 0.91
TIMP3P35625 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC20.72■□□□□ 0.91
TIMP3P35625 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
TIMP3P35625 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.72■□□□□ 0.91
TIMP3P35625 SNX5-217ENST00000606557 1087 ntBASIC20.72■□□□□ 0.91
TIMP3P35625 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
TIMP3P35625 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.72■□□□□ 0.91
TIMP3P35625 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
TIMP3P35625 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TIMP3P35625 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC20.72■□□□□ 0.91
TIMP3P35625 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
TIMP3P35625 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.71■□□□□ 0.91
TIMP3P35625 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.71■□□□□ 0.91
TIMP3P35625 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TIMP3P35625 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
TIMP3P35625 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC20.7■□□□□ 0.91
TIMP3P35625 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.7■□□□□ 0.9
TIMP3P35625 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
TIMP3P35625 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.7■□□□□ 0.9
TIMP3P35625 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TIMP3P35625 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TIMP3P35625 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.7■□□□□ 0.9
TIMP3P35625 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
TIMP3P35625 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TIMP3P35625 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TIMP3P35625 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC20.69■□□□□ 0.9
TIMP3P35625 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.69■□□□□ 0.9
TIMP3P35625 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
TIMP3P35625 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TIMP3P35625 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.69■□□□□ 0.9
TIMP3P35625 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.69■□□□□ 0.9
TIMP3P35625 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
TIMP3P35625 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC20.69■□□□□ 0.9
TIMP3P35625 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
TIMP3P35625 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC20.68■□□□□ 0.9
TIMP3P35625 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TIMP3P35625 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.68■□□□□ 0.9
TIMP3P35625 AL136116.3-201ENST00000402907 1138 ntBASIC20.68■□□□□ 0.9
TIMP3P35625 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TIMP3P35625 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TIMP3P35625 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
TIMP3P35625 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC20.67■□□□□ 0.9
TIMP3P35625 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TIMP3P35625 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.67■□□□□ 0.9
TIMP3P35625 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.67■□□□□ 0.9
TIMP3P35625 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TIMP3P35625 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
TIMP3P35625 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TIMP3P35625 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TIMP3P35625 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TIMP3P35625 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.66■□□□□ 0.9
TIMP3P35625 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TIMP3P35625 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TIMP3P35625 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC20.66■□□□□ 0.9
TIMP3P35625 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TIMP3P35625 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TIMP3P35625 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TIMP3P35625 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TIMP3P35625 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.65■□□□□ 0.9
TIMP3P35625 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.65■□□□□ 0.9
TIMP3P35625 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.65■□□□□ 0.9
TIMP3P35625 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.65■□□□□ 0.9
TIMP3P35625 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
TIMP3P35625 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
TIMP3P35625 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TIMP3P35625 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.64■□□□□ 0.89
TIMP3P35625 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.64■□□□□ 0.89
TIMP3P35625 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TIMP3P35625 AL139246.5-201ENST00000606645 996 ntBASIC20.64■□□□□ 0.89
TIMP3P35625 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.64■□□□□ 0.89
TIMP3P35625 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TIMP3P35625 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TIMP3P35625 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
TIMP3P35625 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.63■□□□□ 0.89
TIMP3P35625 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TIMP3P35625 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
TIMP3P35625 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TIMP3P35625 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
TIMP3P35625 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
TIMP3P35625 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.63■□□□□ 0.89
TIMP3P35625 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
TIMP3P35625 DUSP8P4-201ENST00000399538 1761 ntBASIC20.63■□□□□ 0.89
TIMP3P35625 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TIMP3P35625 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TIMP3P35625 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TIMP3P35625 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TIMP3P35625 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
TIMP3P35625 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TIMP3P35625 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TIMP3P35625 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 140.2 ms