Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 LSR-205ENST00000427250 1606 ntTSL 2 BASIC19.28■□□□□ 0.68
CCL3L1P16619 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCL3L1P16619 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCL3L1P16619 AC090877.2-201ENST00000558441 1738 ntBASIC19.28■□□□□ 0.68
CCL3L1P16619 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCL3L1P16619 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC19.27■□□□□ 0.68
CCL3L1P16619 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCL3L1P16619 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC19.27■□□□□ 0.68
CCL3L1P16619 AC120024.1-201ENST00000562672 995 ntBASIC19.27■□□□□ 0.68
CCL3L1P16619 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCL3L1P16619 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CCL3L1P16619 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCL3L1P16619 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC19.26■□□□□ 0.67
CCL3L1P16619 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCL3L1P16619 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCL3L1P16619 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCL3L1P16619 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC19.25■□□□□ 0.67
CCL3L1P16619 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC19.25■□□□□ 0.67
CCL3L1P16619 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCL3L1P16619 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CCL3L1P16619 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCL3L1P16619 AP003733.4-201ENST00000623785 1697 ntBASIC19.25■□□□□ 0.67
CCL3L1P16619 THA1P-201ENST00000590384 1145 ntBASIC19.25■□□□□ 0.67
CCL3L1P16619 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC19.25■□□□□ 0.67
CCL3L1P16619 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
CCL3L1P16619 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCL3L1P16619 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
CCL3L1P16619 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCL3L1P16619 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC19.24■□□□□ 0.67
CCL3L1P16619 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC19.24■□□□□ 0.67
CCL3L1P16619 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC19.24■□□□□ 0.67
CCL3L1P16619 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCL3L1P16619 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCL3L1P16619 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCL3L1P16619 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC19.24■□□□□ 0.67
CCL3L1P16619 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC19.24■□□□□ 0.67
CCL3L1P16619 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCL3L1P16619 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
CCL3L1P16619 KRT18P24-201ENST00000344739 1156 ntBASIC19.23■□□□□ 0.67
CCL3L1P16619 AL031848.2-201ENST00000607670 837 ntBASIC19.23■□□□□ 0.67
CCL3L1P16619 AC011551.1-201ENST00000614101 683 ntBASIC19.23■□□□□ 0.67
CCL3L1P16619 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCL3L1P16619 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCL3L1P16619 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CCL3L1P16619 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCL3L1P16619 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC19.23■□□□□ 0.67
CCL3L1P16619 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
CCL3L1P16619 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC19.22■□□□□ 0.67
CCL3L1P16619 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCL3L1P16619 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCL3L1P16619 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCL3L1P16619 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCL3L1P16619 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCL3L1P16619 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCL3L1P16619 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCL3L1P16619 GAK-223ENST00000628912 497 ntTSL 5 BASIC19.22■□□□□ 0.67
CCL3L1P16619 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCL3L1P16619 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC19.21■□□□□ 0.67
CCL3L1P16619 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC19.21■□□□□ 0.67
CCL3L1P16619 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCL3L1P16619 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCL3L1P16619 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCL3L1P16619 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCL3L1P16619 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC19.21■□□□□ 0.67
CCL3L1P16619 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC19.21■□□□□ 0.67
CCL3L1P16619 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
CCL3L1P16619 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC19.2■□□□□ 0.66
CCL3L1P16619 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCL3L1P16619 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC19.2■□□□□ 0.66
CCL3L1P16619 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCL3L1P16619 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCL3L1P16619 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCL3L1P16619 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CCL3L1P16619 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCL3L1P16619 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC19.19■□□□□ 0.66
CCL3L1P16619 MIR4281-201ENST00000580852 62 ntBASIC19.19■□□□□ 0.66
CCL3L1P16619 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCL3L1P16619 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCL3L1P16619 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCL3L1P16619 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCL3L1P16619 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCL3L1P16619 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCL3L1P16619 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCL3L1P16619 AC135731.1-201ENST00000569415 2548 ntBASIC19.18■□□□□ 0.66
CCL3L1P16619 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCL3L1P16619 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC19.18■□□□□ 0.66
CCL3L1P16619 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CCL3L1P16619 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CCL3L1P16619 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC19.18■□□□□ 0.66
CCL3L1P16619 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
CCL3L1P16619 HLA-L-211ENST00000482052 1765 ntBASIC19.18■□□□□ 0.66
CCL3L1P16619 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCL3L1P16619 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCL3L1P16619 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CCL3L1P16619 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC19.17■□□□□ 0.66
CCL3L1P16619 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
CCL3L1P16619 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CCL3L1P16619 TK2-216ENST00000564917 1156 ntTSL 3 BASIC19.17■□□□□ 0.66
CCL3L1P16619 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC19.17■□□□□ 0.66
CCL3L1P16619 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms