Protein–RNA interactions for Protein: P16298

PPP3CB, Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CBP16298 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PPP3CBP16298 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
PPP3CBP16298 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
PPP3CBP16298 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PPP3CBP16298 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PPP3CBP16298 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PPP3CBP16298 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PPP3CBP16298 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PPP3CBP16298 AC092803.2-201ENST00000564287 1899 ntBASIC20.78■□□□□ 0.92
PPP3CBP16298 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
PPP3CBP16298 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PPP3CBP16298 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
PPP3CBP16298 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PPP3CBP16298 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.78■□□□□ 0.92
PPP3CBP16298 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PPP3CBP16298 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PPP3CBP16298 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
PPP3CBP16298 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC20.77■□□□□ 0.92
PPP3CBP16298 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PPP3CBP16298 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
PPP3CBP16298 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC20.77■□□□□ 0.92
PPP3CBP16298 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC20.77■□□□□ 0.92
PPP3CBP16298 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
PPP3CBP16298 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.91
PPP3CBP16298 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PPP3CBP16298 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
PPP3CBP16298 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PPP3CBP16298 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC20.76■□□□□ 0.91
PPP3CBP16298 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
PPP3CBP16298 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
PPP3CBP16298 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
PPP3CBP16298 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC20.75■□□□□ 0.91
PPP3CBP16298 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PPP3CBP16298 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PPP3CBP16298 AC120024.1-201ENST00000562672 995 ntBASIC20.75■□□□□ 0.91
PPP3CBP16298 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
PPP3CBP16298 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PPP3CBP16298 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PPP3CBP16298 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
PPP3CBP16298 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
PPP3CBP16298 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PPP3CBP16298 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PPP3CBP16298 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PPP3CBP16298 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PPP3CBP16298 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.74■□□□□ 0.91
PPP3CBP16298 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
PPP3CBP16298 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.73■□□□□ 0.91
PPP3CBP16298 AC133561.1-201ENST00000568600 2415 ntBASIC20.73■□□□□ 0.91
PPP3CBP16298 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC20.73■□□□□ 0.91
PPP3CBP16298 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PPP3CBP16298 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PPP3CBP16298 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC20.73■□□□□ 0.91
PPP3CBP16298 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.73■□□□□ 0.91
PPP3CBP16298 AC137630.3-201ENST00000607245 391 ntBASIC20.73■□□□□ 0.91
PPP3CBP16298 AC011551.1-201ENST00000614101 683 ntBASIC20.73■□□□□ 0.91
PPP3CBP16298 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.73■□□□□ 0.91
PPP3CBP16298 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC20.73■□□□□ 0.91
PPP3CBP16298 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
PPP3CBP16298 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC20.73■□□□□ 0.91
PPP3CBP16298 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
PPP3CBP16298 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
PPP3CBP16298 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PPP3CBP16298 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PPP3CBP16298 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC20.72■□□□□ 0.91
PPP3CBP16298 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
PPP3CBP16298 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PPP3CBP16298 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
PPP3CBP16298 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
PPP3CBP16298 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC20.72■□□□□ 0.91
PPP3CBP16298 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PPP3CBP16298 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
PPP3CBP16298 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC20.72■□□□□ 0.91
PPP3CBP16298 CEBPA-AS1-201ENST00000592982 2198 ntBASIC20.72■□□□□ 0.91
PPP3CBP16298 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PPP3CBP16298 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PPP3CBP16298 AC012676.1-201ENST00000574705 1949 ntBASIC20.71■□□□□ 0.91
PPP3CBP16298 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
PPP3CBP16298 AL356441.2-201ENST00000443009 864 ntBASIC20.71■□□□□ 0.91
PPP3CBP16298 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PPP3CBP16298 MIR4787-201ENST00000607364 84 ntBASIC20.71■□□□□ 0.91
PPP3CBP16298 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PPP3CBP16298 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
PPP3CBP16298 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PPP3CBP16298 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC20.71■□□□□ 0.91
PPP3CBP16298 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.91
PPP3CBP16298 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
PPP3CBP16298 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
PPP3CBP16298 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC20.7■□□□□ 0.9
PPP3CBP16298 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC20.7■□□□□ 0.9
PPP3CBP16298 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.7■□□□□ 0.9
PPP3CBP16298 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC20.7■□□□□ 0.9
PPP3CBP16298 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
PPP3CBP16298 AC131212.1-201ENST00000613771 668 ntBASIC20.7■□□□□ 0.9
PPP3CBP16298 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
PPP3CBP16298 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PPP3CBP16298 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PPP3CBP16298 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PPP3CBP16298 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PPP3CBP16298 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PPP3CBP16298 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms