Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
UBCP0CG48 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
UBCP0CG48 RAP2CP1-202ENST00000605179 643 ntBASIC20.4■□□□□ 0.86
UBCP0CG48 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC20.4■□□□□ 0.86
UBCP0CG48 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
UBCP0CG48 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
UBCP0CG48 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
UBCP0CG48 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
UBCP0CG48 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
UBCP0CG48 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
UBCP0CG48 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
UBCP0CG48 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
UBCP0CG48 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
UBCP0CG48 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
UBCP0CG48 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
UBCP0CG48 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
UBCP0CG48 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
UBCP0CG48 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
UBCP0CG48 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
UBCP0CG48 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
UBCP0CG48 FOXO3B-201ENST00000395675 1928 ntBASIC20.38■□□□□ 0.85
UBCP0CG48 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC20.38■□□□□ 0.85
UBCP0CG48 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.38■□□□□ 0.85
UBCP0CG48 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
UBCP0CG48 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
UBCP0CG48 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
UBCP0CG48 AC079834.2-201ENST00000609776 1949 ntBASIC20.37■□□□□ 0.85
UBCP0CG48 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
UBCP0CG48 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
UBCP0CG48 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC20.37■□□□□ 0.85
UBCP0CG48 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.37■□□□□ 0.85
UBCP0CG48 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.37■□□□□ 0.85
UBCP0CG48 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
UBCP0CG48 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
UBCP0CG48 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC20.36■□□□□ 0.85
UBCP0CG48 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC20.36■□□□□ 0.85
UBCP0CG48 AC004812.2-201ENST00000611079 2094 ntBASIC20.36■□□□□ 0.85
UBCP0CG48 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
UBCP0CG48 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
UBCP0CG48 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
UBCP0CG48 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
UBCP0CG48 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
UBCP0CG48 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC20.35■□□□□ 0.85
UBCP0CG48 AC026202.3-201ENST00000600805 1127 ntBASIC20.35■□□□□ 0.85
UBCP0CG48 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
UBCP0CG48 HLA-L-211ENST00000482052 1765 ntBASIC20.35■□□□□ 0.85
UBCP0CG48 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
UBCP0CG48 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
UBCP0CG48 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
UBCP0CG48 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
UBCP0CG48 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
UBCP0CG48 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
UBCP0CG48 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
UBCP0CG48 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC20.34■□□□□ 0.85
UBCP0CG48 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC20.34■□□□□ 0.85
UBCP0CG48 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
UBCP0CG48 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
UBCP0CG48 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
UBCP0CG48 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
UBCP0CG48 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
UBCP0CG48 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
UBCP0CG48 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
UBCP0CG48 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
UBCP0CG48 HES4-204ENST00000484667 667 ntTSL 3 BASIC20.33■□□□□ 0.85
UBCP0CG48 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.33■□□□□ 0.84
UBCP0CG48 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC20.33■□□□□ 0.84
UBCP0CG48 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
UBCP0CG48 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
UBCP0CG48 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
UBCP0CG48 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
UBCP0CG48 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
UBCP0CG48 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
UBCP0CG48 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC20.32■□□□□ 0.84
UBCP0CG48 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC20.32■□□□□ 0.84
UBCP0CG48 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
UBCP0CG48 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
UBCP0CG48 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.31■□□□□ 0.84
UBCP0CG48 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.31■□□□□ 0.84
UBCP0CG48 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
UBCP0CG48 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.31■□□□□ 0.84
UBCP0CG48 GPX1-201ENST00000419349 1106 ntBASIC20.31■□□□□ 0.84
UBCP0CG48 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
UBCP0CG48 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
UBCP0CG48 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
UBCP0CG48 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
UBCP0CG48 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC20.3■□□□□ 0.84
UBCP0CG48 MIR4449-201ENST00000578365 66 ntBASIC20.3■□□□□ 0.84
UBCP0CG48 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
UBCP0CG48 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
UBCP0CG48 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC20.3■□□□□ 0.84
UBCP0CG48 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
UBCP0CG48 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
UBCP0CG48 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.3■□□□□ 0.84
UBCP0CG48 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
UBCP0CG48 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
UBCP0CG48 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
UBCP0CG48 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
UBCP0CG48 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
UBCP0CG48 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.29■□□□□ 0.84
UBCP0CG48 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms