Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 AC068473.5-201ENST00000616428 2072 ntBASIC21.07■□□□□ 0.96
HMGN1P05114 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.07■□□□□ 0.96
HMGN1P05114 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HMGN1P05114 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC21.06■□□□□ 0.96
HMGN1P05114 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC21.06■□□□□ 0.96
HMGN1P05114 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.06■□□□□ 0.96
HMGN1P05114 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC21.06■□□□□ 0.96
HMGN1P05114 HLA-L-211ENST00000482052 1765 ntBASIC21.06■□□□□ 0.96
HMGN1P05114 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC21.06■□□□□ 0.96
HMGN1P05114 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.06■□□□□ 0.96
HMGN1P05114 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HMGN1P05114 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
HMGN1P05114 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
HMGN1P05114 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
HMGN1P05114 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
HMGN1P05114 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
HMGN1P05114 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC21.05■□□□□ 0.96
HMGN1P05114 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
HMGN1P05114 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
HMGN1P05114 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
HMGN1P05114 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
HMGN1P05114 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
HMGN1P05114 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
HMGN1P05114 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
HMGN1P05114 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC21.04■□□□□ 0.96
HMGN1P05114 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
HMGN1P05114 AC093536.1-201ENST00000569153 554 ntBASIC21.04■□□□□ 0.96
HMGN1P05114 ABCB10P4-201ENST00000566803 2184 ntBASIC21.04■□□□□ 0.96
HMGN1P05114 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
HMGN1P05114 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
HMGN1P05114 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HMGN1P05114 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HMGN1P05114 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HMGN1P05114 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC21.03■□□□□ 0.96
HMGN1P05114 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
HMGN1P05114 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
HMGN1P05114 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HMGN1P05114 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HMGN1P05114 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HMGN1P05114 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC21.02■□□□□ 0.96
HMGN1P05114 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC21.02■□□□□ 0.95
HMGN1P05114 FOXO3B-201ENST00000395675 1928 ntBASIC21.02■□□□□ 0.95
HMGN1P05114 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.95
HMGN1P05114 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
HMGN1P05114 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC21.01■□□□□ 0.95
HMGN1P05114 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
HMGN1P05114 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC21.01■□□□□ 0.95
HMGN1P05114 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
HMGN1P05114 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
HMGN1P05114 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HMGN1P05114 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
HMGN1P05114 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HMGN1P05114 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HMGN1P05114 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC21■□□□□ 0.95
HMGN1P05114 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21■□□□□ 0.95
HMGN1P05114 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC21■□□□□ 0.95
HMGN1P05114 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HMGN1P05114 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC21■□□□□ 0.95
HMGN1P05114 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
HMGN1P05114 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.99■□□□□ 0.95
HMGN1P05114 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.99■□□□□ 0.95
HMGN1P05114 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.99■□□□□ 0.95
HMGN1P05114 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
HMGN1P05114 AC022413.1-201ENST00000624602 984 ntBASIC20.99■□□□□ 0.95
HMGN1P05114 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
HMGN1P05114 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HMGN1P05114 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.98■□□□□ 0.95
HMGN1P05114 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HMGN1P05114 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20.98■□□□□ 0.95
HMGN1P05114 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HMGN1P05114 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
HMGN1P05114 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
HMGN1P05114 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
HMGN1P05114 GFER-205ENST00000569451 517 ntTSL 5 BASIC20.98■□□□□ 0.95
HMGN1P05114 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HMGN1P05114 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HMGN1P05114 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HMGN1P05114 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HMGN1P05114 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
HMGN1P05114 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.97■□□□□ 0.95
HMGN1P05114 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
HMGN1P05114 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC20.97■□□□□ 0.95
HMGN1P05114 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HMGN1P05114 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HMGN1P05114 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HMGN1P05114 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HMGN1P05114 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HMGN1P05114 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HMGN1P05114 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC20.96■□□□□ 0.95
HMGN1P05114 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC20.96■□□□□ 0.95
HMGN1P05114 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC20.96■□□□□ 0.95
HMGN1P05114 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
HMGN1P05114 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.96■□□□□ 0.95
HMGN1P05114 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
HMGN1P05114 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
HMGN1P05114 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
HMGN1P05114 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
HMGN1P05114 AC007029.1-201ENST00000604183 313 ntBASIC20.95■□□□□ 0.94
HMGN1P05114 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HMGN1P05114 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms