Protein–RNA interactions for Protein: P03999

OPN1SW, Short-wave-sensitive opsin 1, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPN1SWP03999 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
OPN1SWP03999 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
OPN1SWP03999 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
OPN1SWP03999 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
OPN1SWP03999 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
OPN1SWP03999 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
OPN1SWP03999 RAP2CP1-202ENST00000605179 643 ntBASIC21.75■■□□□ 1.07
OPN1SWP03999 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.75■■□□□ 1.07
OPN1SWP03999 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
OPN1SWP03999 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
OPN1SWP03999 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
OPN1SWP03999 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
OPN1SWP03999 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC21.74■■□□□ 1.07
OPN1SWP03999 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.74■■□□□ 1.07
OPN1SWP03999 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
OPN1SWP03999 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC21.74■■□□□ 1.07
OPN1SWP03999 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC21.74■■□□□ 1.07
OPN1SWP03999 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
OPN1SWP03999 FOXO3B-201ENST00000395675 1928 ntBASIC21.74■■□□□ 1.07
OPN1SWP03999 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
OPN1SWP03999 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
OPN1SWP03999 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC21.74■■□□□ 1.07
OPN1SWP03999 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
OPN1SWP03999 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
OPN1SWP03999 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
OPN1SWP03999 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC21.73■■□□□ 1.07
OPN1SWP03999 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
OPN1SWP03999 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
OPN1SWP03999 GPX1-201ENST00000419349 1106 ntBASIC21.72■■□□□ 1.07
OPN1SWP03999 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC21.72■■□□□ 1.07
OPN1SWP03999 GFER-205ENST00000569451 517 ntTSL 5 BASIC21.72■■□□□ 1.07
OPN1SWP03999 AC026202.3-201ENST00000600805 1127 ntBASIC21.72■■□□□ 1.07
OPN1SWP03999 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
OPN1SWP03999 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
OPN1SWP03999 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
OPN1SWP03999 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
OPN1SWP03999 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC21.72■■□□□ 1.07
OPN1SWP03999 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.71■■□□□ 1.07
OPN1SWP03999 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
OPN1SWP03999 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
OPN1SWP03999 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC21.71■■□□□ 1.07
OPN1SWP03999 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
OPN1SWP03999 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC21.71■■□□□ 1.07
OPN1SWP03999 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
OPN1SWP03999 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
OPN1SWP03999 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
OPN1SWP03999 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC21.71■■□□□ 1.07
OPN1SWP03999 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC21.71■■□□□ 1.07
OPN1SWP03999 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
OPN1SWP03999 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
OPN1SWP03999 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.7■■□□□ 1.06
OPN1SWP03999 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.7■■□□□ 1.06
OPN1SWP03999 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
OPN1SWP03999 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
OPN1SWP03999 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
OPN1SWP03999 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
OPN1SWP03999 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
OPN1SWP03999 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.7■■□□□ 1.06
OPN1SWP03999 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
OPN1SWP03999 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
OPN1SWP03999 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
OPN1SWP03999 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
OPN1SWP03999 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
OPN1SWP03999 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
OPN1SWP03999 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
OPN1SWP03999 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
OPN1SWP03999 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
OPN1SWP03999 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC21.68■■□□□ 1.06
OPN1SWP03999 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
OPN1SWP03999 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC21.68■■□□□ 1.06
OPN1SWP03999 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
OPN1SWP03999 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
OPN1SWP03999 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
OPN1SWP03999 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC21.67■■□□□ 1.06
OPN1SWP03999 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
OPN1SWP03999 MIR4449-201ENST00000578365 66 ntBASIC21.67■■□□□ 1.06
OPN1SWP03999 MBP-237ENST00000579129 1052 ntTSL 5 BASIC21.67■■□□□ 1.06
OPN1SWP03999 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
OPN1SWP03999 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
OPN1SWP03999 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
OPN1SWP03999 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
OPN1SWP03999 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21.67■■□□□ 1.06
OPN1SWP03999 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
OPN1SWP03999 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
OPN1SWP03999 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
OPN1SWP03999 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
OPN1SWP03999 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
OPN1SWP03999 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
OPN1SWP03999 HES4-202ENST00000428771 1040 ntTSL 2 BASIC21.65■■□□□ 1.06
OPN1SWP03999 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC21.65■■□□□ 1.06
OPN1SWP03999 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.65■■□□□ 1.06
OPN1SWP03999 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
OPN1SWP03999 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
OPN1SWP03999 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
OPN1SWP03999 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC21.65■■□□□ 1.06
OPN1SWP03999 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC21.65■■□□□ 1.06
OPN1SWP03999 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
OPN1SWP03999 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
OPN1SWP03999 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
OPN1SWP03999 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC21.64■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms