Protein–RNA interactions for Protein: P00414

MT-CO3, Cytochrome c oxidase subunit 3, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO3P00414 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
MT-CO3P00414 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC22.41■■□□□ 1.18
MT-CO3P00414 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC22.41■■□□□ 1.18
MT-CO3P00414 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
MT-CO3P00414 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
MT-CO3P00414 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
MT-CO3P00414 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
MT-CO3P00414 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
MT-CO3P00414 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC22.4■■□□□ 1.18
MT-CO3P00414 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
MT-CO3P00414 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.18
MT-CO3P00414 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.17
MT-CO3P00414 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
MT-CO3P00414 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.17
MT-CO3P00414 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC22.39■■□□□ 1.17
MT-CO3P00414 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
MT-CO3P00414 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.17
MT-CO3P00414 MIR5787-201ENST00000611784 55 ntBASIC22.38■■□□□ 1.17
MT-CO3P00414 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC22.38■■□□□ 1.17
MT-CO3P00414 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
MT-CO3P00414 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
MT-CO3P00414 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
MT-CO3P00414 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC22.38■■□□□ 1.17
MT-CO3P00414 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
MT-CO3P00414 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC22.37■■□□□ 1.17
MT-CO3P00414 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
MT-CO3P00414 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
MT-CO3P00414 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
MT-CO3P00414 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
MT-CO3P00414 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
MT-CO3P00414 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
MT-CO3P00414 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC22.37■■□□□ 1.17
MT-CO3P00414 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC22.37■■□□□ 1.17
MT-CO3P00414 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC22.37■■□□□ 1.17
MT-CO3P00414 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
MT-CO3P00414 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
MT-CO3P00414 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
MT-CO3P00414 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
MT-CO3P00414 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
MT-CO3P00414 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC22.36■■□□□ 1.17
MT-CO3P00414 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC22.36■■□□□ 1.17
MT-CO3P00414 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
MT-CO3P00414 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
MT-CO3P00414 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC22.36■■□□□ 1.17
MT-CO3P00414 GATM-206ENST00000558336 1522 ntTSL 2 BASIC22.36■■□□□ 1.17
MT-CO3P00414 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
MT-CO3P00414 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC22.35■■□□□ 1.17
MT-CO3P00414 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC22.35■■□□□ 1.17
MT-CO3P00414 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC22.35■■□□□ 1.17
MT-CO3P00414 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
MT-CO3P00414 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
MT-CO3P00414 AC105265.2-201ENST00000467189 838 ntBASIC22.34■■□□□ 1.17
MT-CO3P00414 AC104564.3-201ENST00000582367 638 ntBASIC22.34■■□□□ 1.17
MT-CO3P00414 AC142086.6-201ENST00000621154 1765 ntBASIC22.34■■□□□ 1.17
MT-CO3P00414 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
MT-CO3P00414 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC22.33■■□□□ 1.17
MT-CO3P00414 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
MT-CO3P00414 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.17
MT-CO3P00414 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
MT-CO3P00414 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
MT-CO3P00414 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
MT-CO3P00414 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
MT-CO3P00414 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.16
MT-CO3P00414 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
MT-CO3P00414 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
MT-CO3P00414 GRAMD4P4-201ENST00000613563 1115 ntBASIC22.32■■□□□ 1.16
MT-CO3P00414 AL136967.2-201ENST00000623968 743 ntBASIC22.32■■□□□ 1.16
MT-CO3P00414 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
MT-CO3P00414 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC22.31■■□□□ 1.16
MT-CO3P00414 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
MT-CO3P00414 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC22.31■■□□□ 1.16
MT-CO3P00414 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
MT-CO3P00414 DUX4L19-201ENST00000557448 1267 ntBASIC22.31■■□□□ 1.16
MT-CO3P00414 AF213884.3-201ENST00000563833 479 ntBASIC22.31■■□□□ 1.16
MT-CO3P00414 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC22.3■■□□□ 1.16
MT-CO3P00414 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
MT-CO3P00414 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
MT-CO3P00414 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC22.3■■□□□ 1.16
MT-CO3P00414 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
MT-CO3P00414 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC22.3■■□□□ 1.16
MT-CO3P00414 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
MT-CO3P00414 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
MT-CO3P00414 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC22.3■■□□□ 1.16
MT-CO3P00414 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC22.29■■□□□ 1.16
MT-CO3P00414 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
MT-CO3P00414 AC004448.1-201ENST00000458332 883 ntBASIC22.29■■□□□ 1.16
MT-CO3P00414 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC22.29■■□□□ 1.16
MT-CO3P00414 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC22.29■■□□□ 1.16
MT-CO3P00414 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
MT-CO3P00414 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC22.28■■□□□ 1.16
MT-CO3P00414 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC22.28■■□□□ 1.16
MT-CO3P00414 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC22.28■■□□□ 1.16
MT-CO3P00414 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
MT-CO3P00414 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
MT-CO3P00414 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC22.28■■□□□ 1.16
MT-CO3P00414 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
MT-CO3P00414 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC22.27■■□□□ 1.16
MT-CO3P00414 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
MT-CO3P00414 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
MT-CO3P00414 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC22.27■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms